Template-based Modeling Results for YAEQ_ECOLI


  Submitted Primary Sequence

>Length 181
MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
CCCCCEEEEEEEEEEECCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCEEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
5424111010101000012211031100001112222220001000001102330310221123310301332232101000101213333023003402200000021200210022013202412202001023310220011043111010002212000113422010111214446
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
1MUSTER3c0uB0.9890.9724.388threading_1HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTRGLC-DDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
2SPARKS3c0ua0.9770.9566.157threading_2HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRD----DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
3PROSPECT23c0uA0.9770.9563.706threading_3HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRD----DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
4PPA-I3c0uB0.9830.9728.238threading_4HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTRGLCD-DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
5HHPRED-l3c0u_A0.9940.9568.152threading_5HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTR----DDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRT-TLQATIQDGVIWLSDDKNNLEVNLTAWQQP-
6HHPRED-g3c0u_A0.9940.9566.835threading_6HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTR----DDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRT-TLQATIQDGVIWLSDDKNNLEVNLTAWQQP-
7SP33c0ua0.9770.9565.766threading_7HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRD----DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
8SAM-T993c0uB0.9770.9616.584threading_8HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRGLCD-DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQ---
9MUSTER2ot9A0.3030.9674.086threading_9-AQPSTTYKFELNLTDLDRGVYESVKQTIARHPSETEER-TVRLLAYAFWYNEQLAFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGS--LRVWEGKVIPAIKNLKNVNIAAVPQDVLEVLAK-DPRVIKWDVI-SEGTVFVTDDRGQHEVQLQWLTGER
10SPARKS2ot9a0.3090.9675.762threading_10-AQPSTTYKFELNLTDLDRGVYESVKQTIARHPSETEER-TVRLLAYAFWYNEQLAFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGS--LRVWEGKVIPAIKNLKNVNIAAVPQDVLEVLAKD-PRVIKWDV-ISEGTVFVTDDRGQHEVQLQWLTGER

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.907 to 2g3wA
TM-score=0.995 to native
SCOP code=c.52.1.33
TM-score=0.903 to 2g3wA
TM-score=0.995 to native
SCOP code=c.52.1.33
TM-score=0.900 to 2g3wA
TM-score=0.988 to native
SCOP code=c.52.1.33
TM-score=0.900 to 2g3wA
TM-score=0.988 to native
SCOP code=c.52.1.33
TM-score=0.909 to 2g3wA
TM-score=0.993 to native
SCOP code=c.52.1.33

  Experimental Structure

Download 3c0uB
SCOP code=c.52.1.33