Template-based Modeling Results for YAEI_ECOLI

Submitted Primary Sequence

>Length 270
MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHCCCEEEEEECCCCCCEEEECCCCCEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV
533112111100000000000000100221101012020221443223010000000100411222101200210242300000000000113222101100200130232110000101222222131011001003200010022210101122220000011122212131222122210100000102001203122000000011110001011011000113224111000112211000020001111020204110000203
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV
1	MUSTER	1s8eA1	0.160	0.741	1.045	threading_1	------------------------------------------------MKFAHLADIHLGYEQFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPLKKAIALLQIPKHSIPVFAIEGNLVRTQRGPS---VLNLLEDFGLERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEFRPTDNAILMLHQGREVSEARGEGYLYYALGHIHKRYETSYSGSPVVYPSLERWVNKGFYIVED-------FKPRFVEIKV------------
2	SPARKS	2zo9b	0.138	0.752	1.927	threading_2	------------------------------------------------MLLAHISDTHFRSRGENAANADVVSQLNALRPDAVVVSGDIVNCGRPEEYQVARQILGSLNYP--LYLIPGNHDDKA--LFLEYLQPLCPQLGSDA-NNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETGGDKPATIFMHHPRLLALVERFPLTRIFCGHNHRQALISTLPGTVHQVPYCHADTDLMHRQVGYQHSLAHYAGPWLPT--------------
3	PROSPECT2	2hy1A	0.144	0.722	2.398	threading_3	------------------------------------------PR--PDYVLLHISDTHLID--ADDRLGELLEQLNQSRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGLVWVMGNHDDR------AELRKFLLDEAPS-MAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQPAPDGTILALHHPALGRVLRGTDVRAILAGHLHYSTN---------------------ATFVGIPVSVASATCGCNLVHV-YPDTVVHSVIP
4	PPA-I	1s8eA1	0.147	0.756	1.281	threading_4	------------------------------------------------MKFAHLADIHLGYEQFAEAFKNALEIAVQENVDFILIAGDLFHSSRPGTLKKAIALLQIPKHSIPVFAIEGNLVRTQRGPSVLNLLEDFEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEFRPTDNAILMLHQGVREVSEARGGYLYYALGHIHKRYETSYSGSPVVYPGSLERWV------NKGFYIVEDFKPRFVEIKV------------
5	HHPRED-l	3av0_A	0.153	0.800	2.799	threading_5	---------------------------------------------GSHMMFVHIADNHLGYRNLDDSFKLCIKKILEIKPDVVLHSGDLFNDLRPKALRIAMQAFKKLHENIKVYIVAGNHEMPRRLGEES-PLALLKDY-VKILDGKDVIN-VNGEEIFICGTYYHKKSKREKLKNAKNYKKKILMLHQPLDHFDLPK--FSYYALGHIHKRILER-FNDGILAYSGSTE-IIYRNEEGKGFYLVDFDISDIEKIDIECREF-VEVNI-
6	HHPRED-g	3av0_A	0.164	0.815	2.976	threading_6	---------------------------------------------GSHMMFVHIADNHLGYRYNDDSFKLCIKKILEIKPDVVLHSGDLFNDLRPKALRIAMQAFKKLHENIKVYIVAGNHEMPRRLGE-ESPLALLKDY-VKILDGKDVIN-VNGEEIFICGTYYHKKSKLDKLKNFENYKKKILMLHQPLDYELHFDLKFSYYALGHIHKRILER-FNDGIAYSSEIIYRNEEDYKEGKGFYLVDGDISDIEKIDIECREFV-EVNIK
7	SP3	2hy1a	0.141	0.711	1.727	threading_7	------------------------------------------PR--PDYVLLHISDTHLIDA--DDRLGELLEQLNQSRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGLVWVMGNHDD------RAELRKFLLDEAPSMAPLDRVCMI---DGLRIIVLDTSVPGHHEELATPAPDGTILALHHPPALGRVLRGTDVRAILAGHLHYSTNATF---------------------VGIPVSVASATCGCNLVHV--YPDTVVHSVI
8	SAM-T99	3auzA1	0.164	0.789	2.292	threading_8	------------------------------------------------MMFVHIADNHLGRQYNLDDREKCIKKILEIKPDVVLHSGDLFNDLPVKALRIAMQAFKKLHENIKVYIVAGNHEMPRRL--GEESPLALLKDYVKILDGKDVIN-VNGEEIFICGTYYHKLDKLKNFESEAKNYKKILMLHQGIELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSIYRNEYEDYKKEGKGFYLVDFSGNDL------ISDIEKIDIE
9	MUSTER	3auzA1	0.147	0.807	1.033	threading_9	--------------------------------------------RGSHMMFVHIADNHLGYRQYYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVLRIAMQAFKKLHENIKVYIVAGNHEMPRRLGEESPLALL--KDYVKILD-GKDVINVNGEEIFICGTYYHKKSKKNFESEAKNYKKKILMLHQPLELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYREDYKKEGKGFYLVDFSGNDLDI-----SDIEKIDIE
10	SPARKS	2dxla	0.139	0.774	1.855	threading_10	------------------------------------------------MLLAHISDTHFRSRGENAANADVVSQLNALRPDAVVVSGDIVNCGRPEEYQVARQILGSLNYP--LYLIPGNHDDK--ALFLEYLQPLCPQLGSDA-NNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETGGDKPATIFMHHPRLLALVERFPLTRIFCGHNHRQALISTLPGTVHQVPYCHEDTDLMHRQVGYQHSLAHYAGPWLYDNISCPT--------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.714 to 1s8eA SCOP code=d.159.1.4	TM-score=0.747 to 1s8eA SCOP code=d.159.1.4	TM-score=0.657 to 3d03A SCOP code=d.159.1.11	TM-score=0.643 to 3d03A SCOP code=d.159.1.11	TM-score=0.754 to 1s8eA SCOP code=d.159.1.4