Template-based Modeling Results for YAEB_ECOLI

Submitted Primary Sequence

>Length 235
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEECCEEEEEEEECCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
4540200100001011423220122222142120101012312213002203211100000000212332120101112222223000000212122111000001021021344210010000111310000001110321311321212213223222010101230131012134323300200120033022211442433220000101301010102340020111125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR
1	MUSTER	1xqbA	0.475	0.779	2.611	threading_1	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIFQ-----------------------VGVFASRATHRPNPL-GSKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSSVKMT-------VEFTEQAKSAVKKREEKRPHLSRFIRQVL-------------EDRIYGMSLYEFNVKWAGTVNCVE-------
2	SPARKS	1xqba	0.475	0.779	4.677	threading_2	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIF-----------------------QVGVFASRATHRPNPL-GSKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSSVKMT-------VEFTEQAKSAVKKREEKRPHLSRFIRQVLED-------------RIYGMSLYEFNVKWAGTVNCVE-------
3	PROSPECT2	1xqbA	0.448	0.779	2.565	threading_3	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIF-----------------------QVGVFASRATHRPNPLG-SKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSSVKMT-------VEFTEQAKSAVKKREEKRP-----------HLSRFIRQ--VLEDRIYGMSLYEFNVKWAGTVNCV-------E
4	PPA-I	1xqbA	0.459	0.779	3.755	threading_4	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIFQ-----------------------VGVFASRATHRPNPL-GSKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSSVKMT-------VEFTEQAKSAVKKREEKRPHLSRFI-------------RQVLEDRIYGMSLYEFNVKWAGTVNCVE-------
5	HHPRED-l	1xqb_A	0.475	0.779	10.310	threading_5	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIFQ-----------------------VGVFASRATHRPNPLG-SKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSS-------VKMTVEFTEQAKSAVKKREEKRPHLSRFIRQVLE-------------DRIYGMSLYEFNVKW---AGTVNCVE----
6	HHPRED-g	1xqb_A	0.475	0.779	9.263	threading_6	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIFQ-----------------------VGVFASRATHRPNPLG-SKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSS-------VKMTVEFTEQAKSAVKKREEKRPHLSRFIRQVLE-------------DRIYGMSLYEFNVKW---AGTVNCVE----
7	SP3	1xqba	0.475	0.779	4.762	threading_7	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIF-----------------------QVGVFASRATHRPNPL-GSKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSSVKMT-------VEFTEQAKSAVKKREEKRPHLSRFIRQVLED-------------RIYGMSLYEFNVKWAGTVNCVE-------
8	SAM-T99	1xqbA	0.494	0.749	6.250	threading_8	-NDLTLSPIAIIHTPYKEKFSVPRQPNLVEDGVGIVELLPPYNSPEAVRGLEQFSHLWLIFQ-----------------------VGVFASRATHRPNPLG-SKVELRQVECINGNIFLHLGAVDLVDGTPIFDIKPYIAYADSEPNAQSS-------VKMTVEFTEQAKSAVKKREEKRPHLSRFIRQVL-------------EDRIYGMSLYEFNVKWA--------------
9	MUSTER	2nv4A	0.382	0.557	2.001	threading_9	I----LKPIGVVKSPFKTQNDAPRQGRFSD-AVSEIAIFDEY--ADGLHKIENLRHIIVLYWDKAS---RDKLRVVPP--GETEERGVFTTRSPSRPNPIGLCVVEILEVERN----RLKVRWLDALDGSPVIDIKKYSPEIDCVNQ----------------------------------------------------------------------------------------
10	SPARKS	2nv4a	0.382	0.557	3.880	threading_10	----ILKPIGVVKSPFKTQNDAPRQGRFSD-AVSEIAIFDEY--ADGLHKIENLRHIIVLYWDKA---SRDKLRVVPP--GETEERGVFTTRSPSRPNPIGLCVVEILEVE----RNRLKVRWLDALDGSPVIDIKKYSPEIDCVNQ----------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.804 to 1xqbA SCOP code=e.56.1.1	TM-score=0.824 to 1xqbA SCOP code=e.56.1.1	TM-score=0.793 to 1xqbA SCOP code=e.56.1.1	TM-score=0.793 to 1xqbA SCOP code=e.56.1.1	TM-score=0.811 to 1xqbA SCOP code=e.56.1.1