Template-based Modeling Results for YADH_ECOLI

Submitted Primary Sequence

>Length 256
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
4311100001000021012002200210000001000000000100011013132121010000000000000100110000000121231011001010111000001000000200000000000000011020200000000000000000000100001032220011000000000000000001121012001000200000000000000001122020000000000000000000000033232244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
1	SPARKS	3nc3a	0.102	0.766	1.059	threading_1	MRAKRRIVVRSFIGDALDHL-SPLIKQNAENLLAPY-----------LERGKSDLVNDFGKTFAVCVTMDMLGLDKRD------HEKISEWHSGVADFSQSPEARAHSLWCSEQLSQYLMPVIKELISILCTALSDKDILALILNVLLAATEPADKTLALMIYHNNPEQMNDVLA--------------DRSLVPRAIAETLRYKPPVQLI--PRQL---SQDTVVG-----------------------GMEIKK
2	PROSPECT2	3a0oA3	0.063	0.992	1.431	threading_2	LNSEQLSAFADAVHCGWAEFYETLWRQMYIDCQEVIYAIRHLAIAAAWDTKGATSRAYNDEAGFRVVVALAWGEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALDEAGEWLDYTVEFLATPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYN--YGWWDLNFDDLVYRHDYPQVEAVS
3	PPA-I	1pw4A2	0.130	0.809	1.094	threading_3	-------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLK--EVKHFA--LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG--------------------NRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF------------------GWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE
4	PROSPECT2	2bkuB2	0.111	0.984	1.396	threading_4	TVAETSASISTFVMDKLGQTMAQSLQELQSNILTVLAAVIVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYL-ETFSPYLLKALNQVDSPVSITAVGFIADISNSLFRRYSDAMMNVLAQMIELKPAVLSVFGDIASNIGADFIPYLNDIMNGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFYVGTIFQFIAQVAEDPQLY---SEDATSRAAVGLIGDIAAMFDWVIDYIKRTRSGQL
5	PPA-I	3zuxA	0.160	0.953	1.057	threading_5	---NILSKISSFIGKTFSLWAALFAAAAFFPYIPWLLGIIMFGMGLTLKPSDF----DILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNGVILVGCCPGGTASNVMTYLARGVALSVAVTSVSTLTSPLLTPALEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSLPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPPVVAVPGALFSVWHNISGSLLATYWAAKA-----
6	PROSPECT2	1r2fA	0.057	0.957	1.363	threading_6	ISAINWDKDLEVWNRAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLTKEVDAAYAWSEENP---PLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR---DEAVHGYYIGYKYQIALQK---LSAIEREELKLFALDL--LMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALFPLSP
7	PROSPECT2	3kb9A	0.056	0.969	1.326	threading_7	QLHPYWPKLQETTRTWLLEKRLMPADKVEEYADGLCYTDLMA------GYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVAGAWRRLRGLLHTALDSPYAFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCELPDAVRKHPAYRRAALLSQEFAAWYNRRRVEECITEFLAV--ERDALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFSTPPYVNN
8	PROSPECT2	1ee4a	0.084	0.973	1.317	threading_8	PEMLQLEAAWALTNPLFIQLLYTGSVEVKEQAIWALGNVTWTLSNLCRGKKPQPDWSVVSQALPTLAKLETLVDACWEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLE-------IADNRIIEVTLDALENILKMGEADKEARGLNINE
9	MUSTER	3zuxA	0.137	0.996	0.922	threading_9	ILSGKTFSLWAALFAAAAFFAPDTF-KWAGPYIPWLLGIIMFGMGLTLKPSDFDILPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLAGNVALSVAVTSVSTLTSPLLTPAIFLQAAGMLMSIVKMVLLPIVLGLIVHKVLGSLPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDNSGLAAALAAAHFVPGALFSVWHNISGWAAKA
10	SPARKS	3e5ja	0.183	0.789	0.866	threading_10	QDEPEHTSDRKLLAKEFVRRMQALRPNIQRIVDEHLDAIEARG-------GPVDLVKTFANAVPSMVISDLFGVPVER------RAEFQDIAEAMMRVDQDAATEAAGMRLGGLLYQLVQERRADLISALIGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALDSPDQLALLRE--------------DPSLVGNAVEELLRYLTIGQFG-GERVA---TRDVEL-----------------------GGVRIAK

Predicted Tertiary Structure


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TM-score=0.437 to 1j30A SCOP code=a.25.1.1	TM-score=0.560 to 1cptA SCOP code=a.104.1.1	TM-score=0.579 to 1j0nA SCOP code=a.102.3.2	TM-score=0.863 to 1pw4A SCOP code=f.38.1.1	TM-score=0.490 to 2hs5A SCOP code=a.4.5.6