Template-based Modeling Results for YACF_ECOLI

Submitted Primary Sequence

>Length 247
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERLDFELACC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERLDFELACC
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERLDFELACC
5542011201111201000100100210232132222100000010002002002103011301320231133021123132122310220031022002112312310210211200110121120210001020010001021232212220220021021002002000100241231220002100122422311000010233240001012210000000022323333034412010113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERLDFELACC
1	MUSTER	2oezB	0.416	0.964	4.088	threading_1	--TTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFDV-EIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQLG-AERFGQALKEDRFLSSIRQRFNLPGGCC-FDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKFAF--ENGQACSQDVEFELAVC
2	SPARKS	2oeza	0.403	0.955	7.729	threading_2	-ATTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFDV-EIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQL-GAERFGQALKEDRFLSSIRQRFNL----CCFDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKFAFENG--QACSQDVEFELAVC
3	PROSPECT2	2oezA	0.403	0.955	4.354	threading_3	-ATTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFDV-EIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQL-GAERFGQALKEDRFLSSIRQRFNL----CCFDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKFAF--ENGQACSQDVEFELAVC
4	PPA-I	2oezB	0.416	0.964	8.511	threading_4	--TTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFDV-EIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQLG-AERFGQALKEDRFLSSIRQRFNLPGGCC-FDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKFAFENG--QACSQDVEFELAVC
5	HHPRED-l	2oez_A	0.400	0.951	12.844	threading_5	-ATTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFD-VEIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQL-GAERFGQALKEDRFLSSIRQRFNL----CCFDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKF-AFEN-GQACSQDVEFELAV-
6	HHPRED-g	2oez_A	0.403	0.955	11.133	threading_6	-ATTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFD-VEIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQL-GAERFGQALKEDRFLSSIRQRFNL----CCFDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKF-AFEN-GQACSQDVEFELAVC
7	SP3	2oeza	0.403	0.955	6.265	threading_7	-ATTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFDV-EIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQL-GAERFGQALKEDRFLSSIRQRFNL----CCFDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKFAFENGQ--ACSQDVEFELAVC
8	SAM-T99	2oezB	0.418	0.960	9.511	threading_8	--TTHKFEHPLNEKTRIYLRVESLLRQAHLASGFADNHQYQLFFRALFDV-EIFEQIQLKSELAKDLEKQRLSYRHWLNVEGVDQEALNSLLNEIDVVHSQL--AERFGQALKEDRFLSSIRQRFNLPGGCC-FDLPALHYWLHLPIERKKHDANQWQKSLKPLSDALTLWLKLARETGHFKAQIARAGFFQSDADEANILRLHIP-KYGVYP-ISGHKNRFAIKFAFEN--GQACSQDVEFELAVC
9	MUSTER	3m1iC1	0.120	0.842	0.622	threading_9	MEGILDFSNDLD-----IALLDQVVSTFYQG-SGVQQKQAQEILTKFQDADQILQFPQSKFIALSILDKLITRK------KLLPNDHRIGIRNFVVGMIISMCQDDE--VFKTQKNLINKSDLTLV---------QILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSA---------EQMTQAKALHLK-NSMSKEFEQI----FKLCFQVLEQGSSSSLIVATLE--LLRY
10	SPARKS	2rgnb	0.138	0.939	0.767	threading_10	RSMYVLSE--LVETEKMYVDLGQIVEGYMATVPESLRGRDRIVFGNIQQIYEWHRDY-----FLQELQRCL-------KDPDWLAQLFIKHERRLHMYVVYCQNKPKSEHVVSEDSYFEELRQQLGHRLQLNDLRIMKYQLLLKNRAGMDTADLEQAVEVMCFVPKRCNDMMTLGRLRGAQGKLLGQDTFWVTEPSRGRERRVFLFEQIIIFSEALGPGYVYKNSI-KVSCEGNLQGDPCRFALTSR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.973 to 2oezB SCOP code=e.68.1.1	TM-score=0.970 to 2oezB SCOP code=e.68.1.1	TM-score=0.962 to 2oezB SCOP code=e.68.1.1	TM-score=0.958 to 2oezB SCOP code=e.68.1.1	TM-score=0.973 to 2oezB SCOP code=e.68.1.1