Template-based Modeling Results for YABI_ECOLI

Submitted Primary Sequence

>Length 254
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
35210220020010000000000000110111001000000000000000112010000000000000000000000012022101321123223210220120034111000000100000100000000002010010000000000000000000000002003001001101010000000000000000012113223213212221020110100000000000000001211101001100121125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
1	PROSPECT2	2bkuB2	0.077	0.972	1.359	threading_1	VMDKLGQTMSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIDVFYAISALAASLGKGFEKYLETFSPYKALNQVDSPVSITAVGFIADISNSLE------EDFRRYSDAMMNVLAQMISNPNARRELKPAV-LSVFGDIASNIGADFIPYLNDIMALCVATLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAAAVGLIGDIAAMFPDGSIKQFREQQKRQLSL
2	PPA-I	3g61A1	0.081	0.972	1.039	threading_2	LAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDV-----GELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGW--QLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKI
3	HHPRED-g	3aqp_A	0.105	0.598	1.087	threading_3	VGPAIGEVMAVLVGLGLILLYVAFRFDWGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTI---VGYSINDSIVVRIRENQKLLR--HLPAELVNRS---INQT------------LSRTVM--------------TSLTTLLPI-------LALLFLGG--SVLRDF----ALAIFVGIFVYVVSALVVAWKNR-------------------------------------------------------
4	PROSPECT2	1r2fA	0.076	0.882	1.357	threading_4	ISNDIPAWQTLSAAEQQLTIRVFTGLTLL---------DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIF--------STLCQTKEVDAAYAWSEEN----------PPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRL---IIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYAALSP
5	PPA-I	3zuxA	0.105	0.862	1.021	threading_5	--NILSKISSFIGKTFSLWAALFAAAAFFATFKWAGPYIPWLLGIIMFGMGLTLKPKVVIIGVIAQFAIMPATAWCLSKLLN----------LPAEIAVGVILVGCCPGG-------------TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLG-----SKTEKLT-----DALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLH
6	PROSPECT2	3kb9A	0.094	1.000	1.349	threading_6	LQETTRTWLLEKADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLHTALDSPGDHLHHEDTLVAGFADSVRRLYAFLPATWFARHFHTVIEAYDREFHNRTIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEIGEVRRRVEECITEFLAVERDALRFADELGKELSGAVRANVGNMRNWFNN
7	PROSPECT2	1kgna	0.091	0.862	1.265	threading_7	VSNDIQSWNKMTPQEQLATMRVFTGLTLLD-------TIQGTVGAISLLPDAETMHEEAVYIAFMESVHAKSYSNIFMTLA------------STPQINEAFRWSEEN-----------ENLQRKAKIIMSYYNGDLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIR----LIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTE-DIYDDLGWTEDVKRFLRYNANS
8	PROSPECT2	1ezfa	0.081	0.921	1.237	threading_8	NSKTCYKYLNQTSRSFAAVIQ-------------ALDGEMRNAVCIFYL-------VLRALDTLEVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLERNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGRKLGDFAKPENIDLAVQCLNELITNAPDVITYLSRLRNQSVFNFCAIPQVQN
9	MUSTER	3zuxA	0.115	0.858	0.764	threading_9	LSKISSFIGKTFSLWAALFAAAAFFADTFKWAGPYIP--IIMFGMGLTLKPSDFHPKVVIIGVIAQFAIMPATAWCLSKLLN----------------------LPAEIAVGVILVGCCPG--TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM---LEIQAAGMLMSIVKMVLLPIVLGLIVHKVLG--SKTEKL-----TDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLH
10	SPARKS	2xwub	0.097	0.976	0.804	threading_10	LSNLYDKLGRLLTSYSWQHTEALLYGFQSIAET--IDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLAPVMINPLVLHALGNPELSVSSVSTLKKICRECKYDLYAANIVAVSQDVLM--KQIHK-TSQCMWLMQALGFLLVEEILKNLHSLISPYIQQLEKLNPSNKLAIVHILGLLSNLFTPVVVVLQQVFQLIQKVLSWLNDAQVVEAVCAIFEKSVKTLLDDFA-PMVPQLCEMLGRMYST

Predicted Tertiary Structure


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TM-score=0.506 to 1j30A SCOP code=a.25.1.1	TM-score=0.770 to 3ea5B SCOP code=a.118.1.1	TM-score=0.506 to 1j30A SCOP code=a.25.1.1	TM-score=0.428 to 2hbkA SCOP code=a.60.8.4	TM-score=0.798 to 1uzrB SCOP code=a.25.1.2