Template-based Modeling Results for YAAH_ECOLI

Submitted Primary Sequence

>Length 188
MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRTVLPIGESH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRTVLPIGESH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRTVLPIGESH
54424211100000000000000000110110202000000000000000000000103321000000000000000000000011321113211120000000000000000000001001000000000000000000010001210010000000000000000000200233102210111336
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRTVLPIGESH
1	SPARKS	3zxpa	0.104	0.872	1.099	threading_1	QVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKES-----------------HLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIHAPGLIAALAYETANFYQKADHTLSSLEPAYS-AKWRKYLHLKMCFYTAYAYCYHGETLL------ASD
2	PROSPECT2	1r2fA	0.064	1.000	1.167	threading_2	ISAINWNKIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISHARSYSSIFSTLCQTKEVDAAYAWSEPPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVLFPPEMAD
3	PPA-I	1pw4A2	0.096	0.947	1.207	threading_3	--TAKLPNKLLWYIAIANVFVYLLRYGILEVKHFASWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW---MNPAGNPTVDMICMIVIGFLIYGPVMLIGLHAFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHELLQELVP-----
4	HHPRED-g	2h88_D	0.222	0.239	1.086	threading_4	VHGDTPIKVANTGLYVLSAITFT-GLCYFNYYD------------VGICKAVAMLWSI----------------------------------------------------------------------------------------------------------------------------------
5	SPARKS	3r9ma	0.114	0.888	1.092	threading_5	QVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKES--------------HLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYS-AKWRKYLHLKMCFYTAYAYCYHGETLL------ASD
6	PROSPECT2	1pw4A2	0.103	0.931	1.134	threading_6	TAKQILPNKLLWYIAANVFVYLLRYGILKEVKHFASWAYFLYEYAGIPGTLLCGWMSDKVFRGN---RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALETAAGFTGLFGYLGGSVAATVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKLQE----------LVP
7	PPA-I	3msvA3	0.075	0.846	1.151	threading_7	-------------ASLKKQQQLEKQKQEASYELSNESRLFLALARAYLEKVRVLVWRHDNEESLANILVNPYIEKAIQYLRPLAQDSTEYFDALTPDS----LRPLYILSSYLFQFGDQFSEAFLLDVCSIITALWLKSVVD-PNTPAYYKLIAQEAVLNNYTTFAEYYMDLLDNSE-----------
8	PROSPECT2	1t33A	0.087	0.920	1.132	threading_8	MNIPTTTTKGESQLIAAALAQFGEYGLHATTAGQNIAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQ------------EDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWP---QFDEEQ
9	PPA-I	2oerB	0.087	0.851	1.067	threading_9	------------SSELVASILEAAVQVLAGAQRFNKAAILFRLQSDEWRRTTRLLGEILEDTTRPRRLVLAFVRSECEEAAIRVALSDAAPLYRDADEAREVKAEGARVFQAFLREALPAEAERSLAGDLLTTTLGAVGKQFSEQPRSEAEIERYAEALADLCAYLAALGER----------------
10	PROSPECT2	1h0oa	0.106	1.000	1.047	threading_10	NPSVERENPDERHFISHVLAFFAASSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASILTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIQYIEFVADRLMLELGFNKIFRVENPE

Predicted Tertiary Structure


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TM-score=0.854 to 1pw4A SCOP code=f.38.1.1	TM-score=0.602 to 1hz4A SCOP code=a.118.8.2	TM-score=0.718 to 1uzrB SCOP code=a.25.1.2	TM-score=0.840 to 1pw4A SCOP code=f.38.1.1	TM-score=0.394 to 3b5nB SCOP code=h.1.15.1