Template-based Modeling Results for WCAK_ECOLI

Submitted Primary Sequence

>Length 426
MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSFDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLSEAVSRERQTGMQMVQSVLERIGEVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSFDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLSEAVSRERQTGMQMVQSVLERIGEVK
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSFDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLSEAVSRERQTGMQMVQSVLERIGEVK
210000001101120000002000200242233120100021222002212321211210111222212211212022102221111000020111132321212300220030022000000001100121100100000000110422000000101213331012001100220200001211002003303122220100010000032323321011013222322233210000012012123422211210130001002201422110000010112322332121002101330233220100133111210030012010000020000000010200000000121011003202131000003211221012001200220220122023002311320130022012312424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSFDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLSEAVSRERQTGMQMVQSVLERIGEVK
1	MUSTER	3beoA	0.118	0.838	1.024	threading_1	LKVMTI----FGTRPEAIKMAPLVLELQKHPEKIESIVTVQHRQMLDQVLSIFGITPDFDLNIMKDRQT--------------------LIDITTRG-------LEGLDKVMKEAK-PDIVLVHGDT-------TTTFIASLAAFYNQIPVGHVEAGLDKYSPYPEEMNRQLTGVMADLHFSPTAKSATNLQKENKDESRIFITGNTAILKTTVKETYSHPVLEKL-----GNNRLVLMTAHRRENLG--------EPMRNMFRAIKRLVDKHEDVQVVYPVHMN-------PVVRETANDILGDYGRIHLI-EPLDVIDFHNVAARSYLMLTDSGGVQEEAPSLGVPVLVLRDTTERPEGIEA----GTLKLAG-TDEETIFSLADELLSD-KEAHDKMSKASNPY-RASERIVEAILKHFNK--
2	SPARKS	3c4qa	0.127	0.869	1.905	threading_2	MRVAMISMHTSPLQGMNVYILSTATELAKQ--GIEVDIYTRATRPSQGEIVRVAENLRVI----NIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVT-----------------YDLIHS--------HYWLSGQVGWLLRDLWRIPLIHTAHTLAAVDTPARRICEQQLVDNADVLAVNTQEEMQDLMHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGR----------LQPFKGPQVLIKAVAALFDRDRNLRVIICGGPT----------YRHMAEELGVEKRIRFL-DPRPPSELVAVYRAADIVAVPSFLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHAWAATAAQLSSLYNDAIANE
3	PROSPECT2	2gt1A	0.118	0.754	1.855	threading_3	MRVLIVKT---SSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAE------------------------------RKAFREALQAYDAVIDAQGL----------VKSAALVTRLAHGVKHGMDW-QTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAI--------------AQHFLTNLPTDAGEYAVFLHATTRDDKHWP-------EEHWRELIGLLADSGIRIKLP-------WGAPHEEERAKRLAEGFAY----VEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITV-YGPTDPGLIGGYGKNQMVCRAPG----------------------------NELSQLTANAVKQFIEENAEKA
4	PPA-I	3dzcA	0.105	0.850	0.976	threading_4	MKVLIV----FGTRPEAIKMAPLVQQLCQD-NRFVAKVCVTGQHREMLDQ---VLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQ-----------------------PDVVLVHGD-------TATTFAASLAAYYQQIPVGHVERTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-------GFERICQALITTAEQHPECQILYPVHLN--------PNVREPVNKLLKGVSNIVLIE-PQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPVLVMRETTERPEAVAA----GTVKLVG-TNQQQICDALSLLLTDPQAYQAMSQAHNPYGDGKACQRIADILAK-----
5	HHPRED-l	1psw_A	0.150	0.704	3.637	threading_5	-KILVIGP---SWVGD---SQSLYRTLQARYPQAIIDV-APAWCRPLLSR-PEVNEAIP--------EIGERRKLGHS--------------------------------L--REKRYDRAYVLPNSFK----------SALVPLFAGIPHRTGWRGE-RYG--L--------LNDVLDKEAWPL-VERYIALAGI-TAQDLPQPLLWPQLQVSEG---EKSYTCNQFSLSSERP-IGFCPGA------EFGPAKRWPHYHYAELAKQLIDEGYQVVLF--------GSAKDHEAGNEILAALNTQAWCRNLAGETQLDQAVILIAACKAIVTNDSGL-HVAAALNRPLVALYGSHKARVIRLITG--GYHQSLIDITPQRVLEELNALLLQEEA-------------------------------
6	HHPRED-g	3tov_A	0.098	0.697	1.918	threading_6	KRIVVTF---L-HLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQ--QV-ENPNIDE-----L----IVVDKK--------GR------------------HNSISGLNEVAREINAKDIVINLHPN-------ER---TSYLAWKIHAPITTG-SHF------LFR----PF-TKY--TRLDRHAAINVLEQLGVTDTS---NSGLHIEICE--EWRCQAQEFYSSHGLTDTDILIGFNIGS--AVPEKRWP-----AERFAHVADYFGRLGYKTVFFGG--------P-DLE-VQPVVEQ-ETK--PIVATGKFQLGPLAAA-NRCNLLITNDSGP-HVGISQGVPIVALPSNPFFYGP---YQAHAIIKGLSVISEEQVIKAAETLLLES---------------------------------
7	SP3	3c4qa	0.159	0.873	1.925	threading_7	MRVAMISMHTSPLQGMNVYILSTATELAKQ--GIEVDIYTRATRPSQGEIVRVAENLRVIN------IAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKV---------------TYDLIHS--------HYWLSGQVGWLLRDLWRIPLIHTAHTLAAVDTPARRICEQQLVDNADVLANTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKG------PQVLIKAVAALFDRDPDRNLRVIIC-------GGPT-----YRHMAEELGVEKRIRFL-DPRPPSELVAVYRAADIVAVPSFLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHAWAATAAQLSSLYNDAIANE
8	SAM-T99	1pswA1	0.158	0.357	0.643	threading_8	-------------------------------------------------------GEKSYT---------------------------------------------------------------------------------------------------------------------------------------------------------CNQF----------SLSSER-PIGFCPGEFGPAKRWPHYHYAEL-------AKQLIDEGYQVVLF--------GSAKDHEAGNEILAALNTW--CRNLAGETQLDQAVILIAACKAIVT----GLHVAAALNRPLVALSHKARVIRLITGEGYHQSLIDI---TPQRVLEELNALLLQEEA-------------------------------
9	MUSTER	2p6pA	0.119	0.847	1.023	threading_9	MRILFVAA---GSPATVFALAPLATAARNA--GHQVVMAANQDGPVVTGVGLPAVADLPIRHFITTDREGRPEAIPSDPVAQARFTGRWFARMAASS-------LPRMLDFSRAWR-PDLIVGGTMS----------YVAPLLALHLGVPHARQT--WDAVDADGIHPGADAELR---------PELSEL----RLPAPDLFIDICPPSLRPANAAPARMQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNF-----DFLRGLAKDLVRWDVELIVAAP-----------DTVAEALRAEVPQ-ARVGWTP-------LDVVAPTCDLLVHAGGVSTLTGLSAGVPQLLIPKGEAPARRVADYGA--IALLPGEDSTEAIADSCQELQAK-DTYARRAQDLSREISGMPATVVTALEQLAHHHH
10	SPARKS	3c48a	0.136	0.864	1.768	threading_10	MRVAMISMHTSPLQQMNVYILSTATELAKQ--GIEVDIYTRATRPSQGEIVRVAENLRVI------NIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKV---------------TYDLIHS--------HYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSARRICEQQLVDNADVLAVNTQEEMQDLMHYDADPDRISVVSPGA----DVELYSPGTERSRRELGIPLHTKVVAFVGR----------LQPFKGPQVLIKAVAALFDRDRNLRVIICGGPSD--------TYRHMAEELGVEKRIRFL-DPRPPSELVAVYRAADIVAVPSFLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTSWAATAAQLSSLYNDAN

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.762 to 1f6dA SCOP code=c.87.1.3	TM-score=0.738 to 1iirA SCOP code=c.87.1.5	TM-score=0.756 to 2bisA SCOP code=c.87.1.8	TM-score=0.718 to 1pswA SCOP code=c.87.1.7	TM-score=0.794 to 1o6cB SCOP code=c.87.1.3