Template-based Modeling Results for WCAJ_ECOLI

Submitted Primary Sequence

>Length 464
MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYALTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYALTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYALTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY
54223343324212200100010000000000000000011121110000000000000000000011120221131021001001000000000000000022021200000000000000000010002100010232222311000001221022002003323211010000011243222223111203200200331312100000322212202200210241201000002012111231201101300001012121210120021012101000111110101001011141323000002121111412202001010122133332122123313300300200230111101200100111000001213022103202310310011130210000001011231223212202210100010021000000010001000300234224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYALTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY
1	SPARKS	3nkla	0.188	0.252	1.507	threading_1	----------------------------------------------------------------------------------------------------------------------------------------------AKKKVLIYGAGSAGLQLANLRQGK---EFHPIAFIDDDRKKHQGITIYR-PKYLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNLDDLVNGKLSIGQLKEVSIDDLLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	3ripA	0.081	0.935	1.515	threading_2	MGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIEQYTGHGGLHGIYLRAFCTGLRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYPVRSALEKILAVCHGVMYKQLSALDQHEEFFIKQGSLRVAEKILFVGESVQMF----------ENNVNLTSILKNQEDTFAAELHRLKQQ------PLFSLVDFEQVVDRIRST-----VAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDLHLTIEYHGASGWAALGLSYRRVQAELQHCWALQMQRKHLKSNQTDAIKWRL-RNHMAFLVDNLQYYLQVDVSTRDFESIRLAHDHFLSNLLAQSFI--LLKPVFHCSLVSQNLLDERGAAQLSILVKGFSRQSSLLFKILSSVRN------HQINY
3	HHPRED-l	3nkl_A	0.198	0.250	2.170	threading_3	----------------------------------------------------------------------------------------------------------------------------------------------AKKKVLIYGAGSAGLQLAN-LRQGK--EFHPIAFIDDDRKK-QGITIY-RPKYLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNLDDLVNGKLSIGQLKEVSIDDLLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	HHPRED-g	3nkl_A	0.190	0.250	3.242	threading_4	-------------------------------------------------------------------------------------------------------------------------------------------AK---KKVLIYGAGSAGLQLAN-LRQGK--EFHPIAFIDDDRKK-QGITIY-RPKYLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNLDDLVNGKLSIGQLKEVSIDDLLG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PROSPECT2	1w36B1	0.074	0.957	1.474	threading_5	MLGLGGSAAFPRPAELRGRIRSNIHELRIACPLYERLLEEIDDKAQAAQWLLGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCREIAQVVFETWKGPQALLRDINIRDLVITRALAEIRETVAREKRRRGRTRFPVAMIDTDPQQYRIFRRIWHHQPETALLLIG----DPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVNQALRFVFKGETKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQEAAQVRDALTLLEIPSVYLSNRDRLESDLVQIVTIHKSK-GLEYPLVWLPFITNFRVQEQAFYHDR-------------HSFEAVLDLNAAPESVDLAEAERLAEDLRLLYV--ALTCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDNDV
6	HHPRED-l	2dt5_A	0.119	0.435	1.575	threading_6	------------------------------------------KVP--------------EAAISRLITYLRILEELEAQGVHRTS-SEQLGGLAQV-------TAFQVRKDLSYFGSYGTRGVGYTVPVLKRELRHIL-GLNRKWGLCIVGMGRLGSALADYPGFG--ESFELRGFFDVDPEKVRGGVI-EHVDLLPQRVPG-RIE---IALLTVPREAAQKAADLLVAAGIKG--ILNFAPVVLEEVAVENV-----------DFLALTRLS---FAILNPK----------------WREEMMG--------------------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-g	2dt5_A	0.105	0.431	2.111	threading_7	--------------------------------------------------------------------KVPEAAISRLITYLRILEELEAQRTSSEQLGGLAQVTFQVRKDLSYFGSYGTRGVGYTVPVLKRELRHIL--GLRKWGLCIVGMGRLGSALADYPGFG--ESFELRGFFDVDPEKVRGGVIE-HVDLLPQRVPG-RIEIALLTVPREAAQKAADLLVA---AGI--KGILNFAPVVLEVPK-----E---VAVENVDFLALTRLSFAILNPKW--------REEMM-----------G--------------------------------------------------------------------------------------------------------------------------------------------------------------
8	PROSPECT2	3a6pA1	0.099	0.808	1.464	threading_8	DPNSTQRYRKTQVAIVRHFGLQILEHVVKSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWP-----DMLIELDTLSKQTELVMFILLRLAEDVVTFQRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAG----------YIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAVSRKGKLEDRKPLMVLFGDV-----AMHYILSAAQTADG-------------GGLVEKHYVFLKRLCQVLCALGNQLCALLG-------------------------------------------------ADSDVETPSNFGKYLETHPSQFLRMTWGALFRH----EILSRDPLLLAIIPKYLRASMTNLVGFPSKTDSPSCEYSRFDFDSDEDFNAFFNGEVRLACRLDPKTSFQMAGEWLKYQL---STF
9	HHPRED-l	3keo_A	0.097	0.420	1.554	threading_9	------------------------------------------SIPKATAKR----LSLYYR--IFKRFNTDGIEKASSKQIADALGID--SATVRRDFSYFGELG-RRGFGYD----------------VKKLMNFFAENDHSTTNVMLVGCGNIGRALLHYRFH-DRNKMQISMAFDLDSLVEDGIPVYG-ISTINDHL-DSDIETAILTVPSTEA---QEVADILVKAGIKGILSPVHLTLP-KDIIVQYVD--------LTSLQTLLYFMNQ--QR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	HHPRED-g	3keo_A	0.072	0.390	1.723	threading_10	------------------------------------------------------------------SI--PKATAKRLSLYYRIFKRFNIADALGIDSAT-------VRRDFSYFLGRRGFGVKKLMNFFAEILN-----DHSTTNVMLVGCGNIGRALLHYRF-HDRNKMQISMAFDLDSNVEDGIPVYG-ISTINDHL-DSDIETAILTVPSTEAQ---EVADILVKAGIKGILSPVHLTLP---------KDII---VQYVDLTELQTLYFMNQQR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.424 to 2g6tA SCOP code=c.147.1.1	TM-score=0.372 to 1h2sB SCOP code=f.17.4.1	TM-score=0.444 to 2g6tA SCOP code=c.147.1.1	TM-score=0.438 to 2g6tA SCOP code=c.147.1.1	TM-score=0.612 to 1w36E SCOP code=c.37.1.19