Template-based Modeling Results for WCAC_ECOLI

Submitted Primary Sequence

>Length 405
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCEEEECCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCHHHHHHHCCCCEEEEEEEEHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHEECCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
201000012113100000011002202522010100002242233211233122002122301001201112113330100012002100321111000000000010102000200110232323010000001111010201113103113210320221321221101202200101220021022100100000210020022112302020001001022112223132023232322000000002231320320021013123201000004133222220011112221310000022000000012222011000000111000000213102200223000002331121002002220222210210130012023201032002101200332
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
1	MUSTER	3c4qA	0.142	0.884	2.036	threading_1	MRVAMISMHTDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVA-ENLRVINIAAGPYEGLSKEELPTQ--LAAFTGGMLSFTRREKYDLIHSHY---------WLSGQVGWLLRDLWRIPLIHTAHTLAAV----------------------------------TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDPDRISVVSPGADVELYSPGNDTERSRRELGIPTKVVAFVGRLQPFKGPQVLIKAVAALDPDRNLRVIICGGPGVEKRIRFLDPR-PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGTGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA
2	SPARKS	3mboa	0.152	0.862	4.182	threading_2	MKLKIGITCYSVGGSGVVGTELGKQLAERGHEIHFITSGLPFVYPNIYFHEVTVNQYSVFQ-------------YPPYDLALASKMAEVAQRENLDILHVHYAIP------HAICAYLAKQMIGERIKIVTTLHGTDI---------------------TVLGSDPSL------------NNLIRFGIEQSDVVTAVSHSLINETHELVPNKDIQTVYNFIDERVYFKR-DMTQLKKEYGISEKILIHISNFRKVKRVQDVVQAFAKIVTDAKLLLVGDGPEHIEDRVLFLGKQDN---VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEFRSEKIVSQYETIYYDV
3	PROSPECT2	3c48A	0.129	0.899	3.334	threading_3	MRVAMISMHTLQQGMNVYILSTATELAKQGIEVDIYTRATRPSGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRR--EKVTYDLIHSH---------YWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYDT-----------------------------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADRISVVSPGADVELYSPGTERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALDPDRNLRVIICGGPSVEKRIRFLDPR-PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGTGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA
4	PPA-I	3c4qA	0.136	0.891	2.372	threading_4	MRVAMISMHTDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAG-PYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHY---------WLSGQVGWLLRDLWRIPLIHTAHTLAAVDT---------------------------------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDPDRISVVSPGADVELYSPGNDTERSRRELGIPTKVVAFVGRLQPFKGPQVLIKAVAALDRNLRVIICGGPTYGVEKRIRFLDPR-PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGTGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA
5	HHPRED-l	3c48_A	0.139	0.872	3.248	threading_5	MRVAMISMHTP--GMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVVAENLRVINIAAGPY--EGLSKEELPTQ-LAAFTGGMLSTRREKVTYDLIHSHYWLS---------GQVGWLLRDLWRIPLIHTAHTLAAVKNSY----DT-------------------------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDPDRISVVSPGADVELYSPG---ERSRRELHTKVVAFVGRLQ--PFKGPQVLIKALFDRDPDRNLIICGGPS---VEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGTGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYND-
6	HHPRED-g	3s28_A	0.142	0.921	3.030	threading_6	FNVVILSPHGYFGGQVVYILDQVRALKQQGLNIKILTRLLPDAVGTVYDSEYCDILRVPFRTEK--GIVRKWISRFEVWPYLETYTAVESKNGKPDLIIGNY---------SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDS--------------------DIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIATLPGLYFDPKFNIVSPGADMSIYFPYTEE-KRREHLCVKKPILFTMARLDRVKNLSGLVEWYGKNTELANLVVVGGDRRKLNGQFRWISSQMDRVRNGELYRTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGSGFHIDPYHGDQAADTLADFFEDPSHWDEISKGGLRIEEKYTWQIYSQRLLTLTGVY
7	SP3	3mboa	0.158	0.862	4.161	threading_7	MKLKIGITCYSVGGSGVVGTELGKQLAERGHEIHFITSGLPFVYPNIYFHEVT-----------VNQYSVFQYPP--YDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQM------IGERIKIVTTLHGTDI---------------------TVLGSDPSL------------NNLIRFGIEQSDVVTAVSHSLINETHELVPNKDIQTVYNFIDERVYFKR-DMTQLKKEYGISEKILIHISNFRKVKRVQDVVQAFAKIVTDAKLLLVGDGPEFIEDRVLFLGKQDN---VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEFRSEKIVSQYETIYYDV
8	SAM-T99	2jjmL	0.149	0.830	3.830	threading_8	---LKIGITCYPGGSGVVGTELGKQLAERGHEIHFITSGLP------------------KVYPNIYFHEVTVNFQYPPYDLALSKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIG------ERIKIVTTLHG---------------------------TDITVLGSDPSLNNL------IRFGIEQSDVVTAVSHSLINETELVKPNKDIQTVYNFIDERVYFKRDMT-QLKKS---KILIHISNF--RKVKRVQDVVQAFAKIEVDAKLLLVGDGPEFIEDRVLFLGKQDN---VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVEQFRSEKIVSQYETIYYDV
9	MUSTER	2jjmL	0.162	0.840	1.976	threading_9	LKIGITC---YPGGSGVVGTELGKQLAERGHEIHFITSGLPKVYPNIYFHEVT-----------------VNFQYPPYDLALASKMAEVAQRENLDILHVHYAI-----PHAICAYLAKQMIGE-RIKIVTTLHGTDI---------------------TVLGSDPS------------LNNLIRFGIEQSDVVTAVSHSLINETHELVPNKDIQTVYNFIDERVYFKR-DMTQLKKEYGIS-KILIHISNFRKVKRVQDVVQAFAKIVVDAKLLLVGDGPEFIEDRVLFLGKQDN---VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYE-RSEKIVSQYETIYYDV
10	SPARKS	3c48a	0.123	0.901	4.071	threading_10	MRVAMISMHTSQQGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVA-ENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSH---------YWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYDT-----------------------------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDPDRISVVSPGADVELYSPGTERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALDPDRNLRVIICGGPGVEKRIRFLDPR-PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGTGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA

Predicted Tertiary Structure


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TM-score=0.762 to 2iw1A SCOP code=c.87.1.8	TM-score=0.784 to 2iw1A SCOP code=c.87.1.8	TM-score=0.728 to 2iw1A SCOP code=c.87.1.8	TM-score=0.589 to 2iw1A SCOP code=c.87.1.8	TM-score=0.786 to 2iw1A SCOP code=c.87.1.8