Template-based Modeling Results for WBBJ_ECOLI

Submitted Primary Sequence

>Length 196
MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDGSINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFITDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVGANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDGSINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFITDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVGANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCEEEECCCEEEECCCEEECCCEEEEECCCCCEEECCCEEECCCCEEEECCCEEECCCCEECCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCCCCEEEECCCCEEEEEECCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDGSINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFITDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVGANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA
5323103211000102000110002002320210222010112110100320101200100000211010011000021000001110100300000120000112010123211122231233232232110001220000110000300100200000010001110130000000102001202443321122
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDGSINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFITDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVGANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA
1	MUSTER	2ic7A	0.282	0.888	3.507	threading_1	--MKSEKEKMLAGHLYNPADLELVKERERARRLVRLRTGLLKELFGSTGERLFIEPNFRCD-YGYN-IHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHER---------NSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWLK---------
2	SPARKS	3v4ea	0.250	0.898	5.006	threading_2	M---TEKEKMLAEKWYDANDQYLINERARAKDICFKRKELIDQLFQTTTDNVSISIPFDTD-YGWN-VKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHR---------NEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKIDNDL------
3	PROSPECT2	2ic7A	0.264	0.888	3.230	threading_3	M--KSEKEKMLAGKERERARRLVRLYNETLETEYDKRTGLLKELFGSTGERLFIEPNFRCD--YGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHER---------NSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWLK---------
4	PPA-I	2ic7A	0.276	0.888	4.368	threading_4	--MKSEKEKMLAGHLYNPADLELVKERERARRLVDKRTGLLKELFGSTGERLFIEPNFRCD-YGYN-IHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERN---------SGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWLK---------
5	HHPRED-l	1krr_A	0.258	0.929	2.627	threading_5	-NMPMTE-RIRAGKLFTDMCEGLPEKRLRGKTLMYEPESLIKEMFATVGENAWVEPPVYFS--YGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHEL---------RKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYF-
6	HHPRED-g	1krr_A	0.257	0.934	3.777	threading_6	--NMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNSLIKEMFATVGENAWVEPPVYFS-YGSN-IHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGE---------MYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFK
7	SP3	3v4ea	0.250	0.898	4.867	threading_7	M---TEKEKMLAEKWYDANDQYLINERARAKDICFKRKELIDQLFQTTTDNVSISIPFDTD-YGWN-VKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRN---------EGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKIDNDL------
8	SAM-T99	2ic7A	0.236	0.888	3.906	threading_8	-GHLYNPADLELVKERERARRLVRLYNETLETEYDKRTGLLKELFGSTGERLFIEPNFRCD--YGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHER---------NSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWL----------
9	MUSTER	1krvA	0.264	0.929	3.490	threading_9	M---PMTERIRAGKLFTDMCEGLPEKRLRGKTLMEKRESLIKEMFATVGENAWVEPPVYFS-YGSN-IHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELR---------KNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFK
10	SPARKS	3nz2a	0.219	0.862	4.743	threading_10	----SELEKL-KGEHFDGASAEIEALRSQAGRLKLERYALQRELFGHLGHKSCVQPPFHCE-FGKT-IRIGDHTFIN--NVVLDGAPITIGDHVLIGPSTQFYTASHSLDYRRR---------QAWETICKPIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVNQDVPPDTLVGGTPARILRSLK---------

Predicted Tertiary Structure


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TM-score=0.885 to 1ocxA SCOP code=b.81.1.3	TM-score=0.906 to 1krvA SCOP code=b.81.1.3	TM-score=0.863 to 1ocxA SCOP code=b.81.1.3	TM-score=0.868 to 1ocxA SCOP code=b.81.1.3	TM-score=0.885 to 1ocxA SCOP code=b.81.1.3