Template-based Modeling Results for VSR_ECOLI

Submitted Primary Sequence

>Length 156
MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
553222321112003111343111121000001221010111222021210000132200000100101202022130121212101310121131023102204410010000010313353321331012102210113222010243223225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
1	MUSTER	1cw0A	1.000	0.994	4.584	threading_1	-ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
2	SPARKS	1vsra	1.000	0.859	4.721	threading_2	----------------------AIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
3	PROSPECT2	1vsra	1.000	0.859	2.834	threading_3	----------------------AIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
4	PPA-I	1cw0A	1.000	0.994	10.522	threading_4	-ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
5	HHPRED-l	1cw0_A	1.000	0.987	8.723	threading_5	-ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLL-
6	HHPRED-g	1cw0_A	1.000	0.994	7.529	threading_6	-ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
7	SP3	1vsra	1.000	0.859	4.655	threading_7	----------------------AIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
8	SAM-T99	1cw0A	1.000	0.994	8.239	threading_8	-ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
9	MUSTER	3r3pA	0.206	0.622	1.413	threading_9	---------------------TTPERRVKEILDEMDIVYFTHH-VVEGWNVAFYLGKKLAIEVNGVYWAS-------------------KQKNVNKDKRKLSELHSKGYRVLTIEDDELND-----IDKVKQQIQKFWVTHIS-------------
10	SPARKS	3r3pa	0.206	0.622	1.869	threading_10	---------------------TTPERRVKEILDEMDIVYFTH-HVVEGWNVAFYLGKKLAIEVNGVYWAS-------------------KQKNVNKDKRKLSELHSKGYRVLTIEDDELNDI-----DKVKQQIQKFWVTHIS-------------

Predicted Tertiary Structure


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TM-score=0.991 to 1cw0A TM-score=0.994 to native SCOP code=c.52.1.15	TM-score=0.991 to 1cw0A TM-score=0.994 to native SCOP code=c.52.1.15	TM-score=0.851 to 1cw0A TM-score=0.853 to native SCOP code=c.52.1.15	TM-score=0.851 to 1cw0A TM-score=0.853 to native SCOP code=c.52.1.15	TM-score=0.991 to 1cw0A TM-score=0.994 to native SCOP code=c.52.1.15

Experimental Structure

Download 1cw0A

SCOP code=c.52.1.15