Template-based Modeling Results for VISC_ECOLI

Submitted Primary Sequence

>Length 400
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR
CCEECEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCEEEEEECCCCEEEECEEEEECCCCCHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR
4321000000000000000000321202000013223332223222211000001101200250101320023201101000002331112110213202222000001011012001210241230201020202201223320101033222010100000111102012203021222313110000002033223100010011301000000132100000001223102312302332002001210223212021111210010001002211121000000001000100010000001001100110220232232212220022123112210000000010012001121101200010002002101101110022012133113115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR
1	MUSTER	2x3nA	0.219	0.890	2.838	threading_1	-NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARREN---------GADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL-LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERIDQVRLNDGRVLRPRVVVGADGIASYVRRRLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRESLRRRLQRFSAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL--EDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDT-------------------------------
2	SPARKS	2x3na	0.216	0.890	5.298	threading_2	-NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR---------ENGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL-LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHDQVRLNDGRVLRPRVVVGADGIASYVRRRLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRESLRRRLQRFVGEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL--EDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDT-------------------------------
3	PROSPECT2	2x3nA	0.216	0.890	5.214	threading_3	-NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR---------ENGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE-LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERIDQVRLNDGRVLRPRVVVGADGIASYVRRRLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALE--DALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFD-------------------------------T
4	PPA-I	2x3nA	0.219	0.890	4.368	threading_4	-NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR---------ENGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGELL-RYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERIDQVRLNDGRVLRPRVVVGADGIASYVRRRLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL--EDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDT-------------------------------
5	HHPRED-l	2qa1_A	0.208	0.927	2.637	threading_5	RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE-TGE------SRGLGFTARTMEVFDQRGILPRFGEV--ETSTQGH--FGG-L-PIDFG-VLEGAWQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDDGAGVTVEVRGPHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQ-PRMIGETLPGGMVMVGPLPGGIT-RIIVCEGTPP-----PPSWHEVADAWKRLTGDDIAHA-EPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGT---ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTELI-QYGEVARHLAGMVSGLEITYDVL-
6	HHPRED-g	2qa1_A	0.208	0.927	2.935	threading_6	RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE-------TGESRGLGFTARTMEVFDQRGILPRFGEV--E------TSTQGHFGGLPIDFGVLEGAQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDDGAGVTVEVRGPETLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPR-MIGETLPGGMVMVGPLPG-GITRIIVCERTPP-----PPSWHEVADAWKRLTGDDIAHAEPV-WVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVN-GT--ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTELI-QYGEVARHLAGMVSGLITYDVLGK
7	SP3	2x3na	0.216	0.890	5.597	threading_7	-NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR---------ENGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL-LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHDQVRLNDGRVLRPRVVVGADGIASYVRRRLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL--EDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDT-------------------------------
8	SAM-T99	2x3nA	0.227	0.882	3.164	threading_8	-NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR---------ENGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYH-DGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHDQVRLNDGRVLRPRVVVGADGIASYVRRRLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALR--DACALEDALAGYQAERFPVNQAIVSYGHALATSLEDR--------------------------QRFAGV--------
9	MUSTER	3fmwC1	0.230	0.925	2.145	threading_9	--TTDVVVVGGGPVGLMLAGELRAGGVGALVLEK------LVEPVGHDRAGALHIRTVETLDLRGLLDRFLE-GTQVAKGLPFAGIFTQG-LDFGLVDTRHPYTG-LVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQDAEAVEVTVAGPYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPEREVPRRWER-TPDGILVL-AFPPGWSSSSTGHSDEG------PVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVR---GWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELLGT-DEVNRYFTGMITGTDV------
10	SPARKS	3fmwa	0.231	0.930	3.248	threading_10	----DVVVVGGGPVGLMLAGELRAGGVGALVLEKLV------EPVGHDRAGALHIRTVETLDLRGLLDRFL-EGTQVAKGLPFAGIFTQG-LDFGLVDTRHPYTG-LVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQDAEAVEVTVAGPSPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPEREVPRRWER-TPDGILVLAFPPGWSSSSTGHSGP---------VTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARV---RGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELLG-TDEVNRYFTGMITGTDVRYATFA

Predicted Tertiary Structure


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TM-score=0.804 to 1phhA SCOP code=c.3.1.2	TM-score=0.798 to 1phhA SCOP code=c.3.1.2	TM-score=0.798 to 1phhA SCOP code=c.3.1.2	TM-score=0.800 to 1phhA SCOP code=c.3.1.2	TM-score=0.809 to 1phhA SCOP code=c.3.1.2