Template-based Modeling Results for UVRB_ECOLI

Submitted Primary Sequence

>Length 673
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
CCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHCCCEEECCCEECHHHHHHHHHHHCCEECCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
5542110212132223223102301310342222000000210010000020023133100000112210230021014002320010000111122231200111100211121232012100200310134320000000100121010310231102012122020310031003110111322223020202110010000113310000100211011001012222311120120000022211023320230033023202211421243332212220121021003102312212102100200122222321100011011201000110210021011113112211220041022012112122111310122132100000020212133122311100012222123112012222203100210221133322000002133003200300342212020012322212112112213313010000011033113012010000021222222322320021012024123121001012012100200231233023112102322212410102011012112211323232313233122122102311231033103301220131034021310020121023023111324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
1	SPARKS	1c4oa	0.613	0.749	9.729	threading_1	---TFRYRG-PSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNL-------------------------------------------------------------------------------VGFVLFPATHYLSP-EGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSG-RVVEQIIRPTGLLDPLVRVKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADRVSEAMQRAIEETNRRRALQEAYNLEHGITPETV------------------------------------------------------------------------------------
2	SPARKS	2eyqa	0.182	0.868	6.202	threading_2	-----------------PEQYRYTLP-VKAGEQ-RLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQNLADWETLPYDSFSPH-----------------QDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMG-SELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTF-----------------EVKRDPEHIYQQVSKGTLPAGIEYWQPLFF----SEPLPPLFSYFPANTLLVNTGD--LETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLG---FQKL----PDL---AVQAQQKAPLDALRKFLETDGPVVFSVESEGRREALGELLARIKIAPQRIMR----------LDEASDR--GRYLMIGAAEHGFVDTVRNLALICESDLLGVARRRQDSRRTINPDTLIRNLAELHIGQPVVH-LEHGVG-----RYAGMTTLEAGGITGEYLMLTYANVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHD-REQYQLFCDSF
3	PROSPECT2	1d9xA	0.636	0.877	5.130	threading_3	-EGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQYDRND--IFRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIEAE--VDALTGKVLGEREHVAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYELEHSPG-VVEQIIRPTGLLDPTIDVRPTKGQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNANGHVIMYADTITKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDV-----------------------------------------------------------------------------
4	PROSPECT2	2eyqA	0.188	0.844	3.818	threading_4	------------PEQYR------YTLPVKAG-EQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNWETLPYDSFSPHQD-----------------IISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMG-SELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWR-----------------DTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLF----FSEPLPPLFSYFPANTLLVNTGDLET--SAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNILTLTATPIPRTLNMASGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFG----LAQLHQLRGRVGR---SHHQAYAWLLTPHPK-AMTTDAQKRLEAIASLEDLG-------------------------------------AGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELENAVDALKAEDLTSQ
5	HHPRED-l	1c4o_A	0.615	0.734	1.233	threading_5	---TFRYRGP-SPKGDQPKAIAGLVEALRDGE---TLLGATGTG-TVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEI-RLRHSTTRSLLTRRDVIVVASVSAIYG-GDPREYRARNLV-------------------------------------------------------------------------------GFVLFPATHYLSPEG-LEEILKEIEKELWERVRYFEERGE--YAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHS-GRVVEQIIRPTGLLDPLVRVKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNA-GEVWLYADRVSEAMQRAIEETNRRRALQEAYN-EHGITPETV------------------------------------------------------------------------------------
6	HHPRED-l	2eyq_A	0.172	0.837	1.231	threading_6	--------------------PEQYRYTLKAGEQ-RLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQ-MVMNL-------------ADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMG-SELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTF----------EVKRDP-------EHIYQQVSKGTLPAGIEYWQPLFFS----EPLPPLFSYFPANTLLVNTGDL--ETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKA-ANANLGFQK---------LPDLAVQAQQKAPLDALRKFLETDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEA------------SDRGRYLMIGAAEHGFVDTVRNLALICESDLLGERVA---------RR-RQDS--------RRTINPDTLIRNLAELHIGQPVVHLEHGV---GRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSISRYAGGAEENAPLHKLGGDAWSRARQ-------KAAEKVRDVAAELLDI-
7	HHPRED-g	1c4o_A	0.615	0.734	5.462	threading_7	---TFRYRGP-SPKGDQPKAIAGLVEALRDGE---TLLGATGTG-TVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEI-RLRHSTTRSLLTRRDVIVVASVSAIYG-GDPREYRARNLV-------------------------------------------------------------------------------GFVLFPATHYLSPEG-LEEILKEIEKELWERVRYFEERGE--YAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHS-GRVVEQIIRPTGLLDPLVRVKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNA-GEVWLYADRVSEAMQRAIEETNRRRALQEAYN-EHGITPETV------------------------------------------------------------------------------------
8	HHPRED-g	2eyq_A	0.188	0.845	3.338	threading_8	--------------------PEQYRYTLPVKAGEQRLLGLTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQ-MVMNLALPYDSFSPHQ-----------------DIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSE-LPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAA----IELFRSQWRDTFE-------------VKRDPEHIYQQVSKGTLPAGIEYWQPLFF----SEPLPPLFSYFPANTLLVNTGDLETSAE--RFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNRVQLKTEHLPTKAAN--ANLGFQK-L------PDL---AVQAQQKAPLDALRKFLEFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASD------------RGRYLMIGAAEHGFVDTVRNLALICESDLLGERVARR-------------RQD-----SRRTINPDTLIRNLAELHIGQPVVHLEHGVTTLEAGGITGEYLMLTYANDAKLYSLHLISRYGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAADQAQAINAVLSDMC
9	SP3	1c4oa	0.560	0.749	9.760	threading_9	---TFRY-RGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVPGKDLYI-------------------------------------------------------------------------EKDASINPEIERLRHSTTRSLLTR------RDVIVVASVSAIYGLGDPREYRARNLVGFVLFPATHYLSP-EGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSG-RVVEQIIRPTGLLDPLVRVKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADRVSEAMQRAIEETNRRRALQEAYNLEHGITPETV------------------------------------------------------------------------------------
10	SP3	2eyqa	0.195	0.897	5.952	threading_10	-----------------PEQYRYTLP-VKAGEQ-RLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQNLADWETLPYDSFSPH-----------------QDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMG-SELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTF-----------------EVKRDPEHIYQQVSKGTLPAGIEYWQPLFF----SEPLPPLFSYFPANTLLVNTGD--LETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNILTLTATPIPRTLNMAMSGMRDLSIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFG----LAQLHQLRGRVGRHHQAYAWLLTPH-----PKAMTTDAQKRLEAIASLEDLGISMETIGENAVDALKAGREPSLEDLTSQQTEVELRMPLSFYKRIASAKTENELEEIKVELIDRDPARTLLDIARLRQQAQKLGIRKLEGN

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.828 to 1d2mA SCOP code=c.37.1.19	TM-score=0.750 to 2eyqA SCOP code=b.34.18.1	TM-score=0.856 to 1d2mA SCOP code=c.37.1.19	TM-score=0.615 to 2eyqA SCOP code=b.34.18.1	TM-score=0.821 to 1d2mA SCOP code=c.37.1.19