Template-based Modeling Results for UMUC_ECOLI

Submitted Primary Sequence

>Length 422
MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK
CEEEEECCCHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCCCCCHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK
20000002010000111132312220000102220000001220231103101000201310330100001021210120021011002300330110000000000220430420220022012101330400000000303100200221233234321000001123202310120203200000320031024110200110130223101310110022002201321113133223232201011101351221210120012002200320343321010000002112122333222110012122113113100200020022112222200100000011233222213113332332112201200120033103100100031133312112321123121312211424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK
1	MUSTER	3fdsA	0.262	0.813	2.549	threading_1	IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFDSGAVATANYEARKFGVKAGIPIVEAKKILPN--AVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPN-----GIKVI-DDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGAKAKYLISLARDEYNEPIRT--RVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLD--KRIPKAIHVVAVTEDLDI------VSRGRTFPHGIS-KETAYSESVKLLQKILEDERKIRRIGVRFSKFIEAI--GLDKFFDT----------------------------------------------------------
2	SPARKS	1jx4a	0.249	0.780	5.396	threading_2	IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVEDSGAVATANYEARKFGVKAGIPIVEAKKILPNA---VYLPRKEVYQQVSSR-INLLREYSEKIEIASIDEAYLDISDVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAAD-AKPNG------IKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGIGEAKAKYLISLARDEYNEPIRT--RVRKSIGRIVTK-RNSRNLEEIKPYLFRAIEESYYKL--DKRIPKAIHVVAVTEDLDI------VSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI-----------------------------------------------------------------------
3	PROSPECT2	3gqcA	0.217	0.818	3.879	threading_3	CIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGAEIASCSYEARQLGIKNGMFFGHAKQLCP--NLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAELTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDG------QYHLKPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPTGQMLYRFCRGLDDRPVRTEKERK-SVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMTAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVPTN--------------------------------------------------------------------
4	PPA-I	3fdsA	0.241	0.815	5.919	threading_4	IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFDSGAVATANYEARKFGVKAGIPIVEAKKILP--NAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYEAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNG------IKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIEAKAKYLISLARDEYNEPIRTR--VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLD--KRIPKAIHVVAVTEDLDI------VSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDK-FFDT-----------------------------------------------------------
5	HHPRED-l	3gqc_A	0.212	0.818	4.763	threading_5	CIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGIASCSYEARQLGIKNGMFFGHAKQLCPN--LQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQ------YHLKPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPTGQMLYRFCRGLDDRPVRTE-KERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVPTN--------------------------------------------------------------------
6	HHPRED-g	3gqc_A	0.217	0.818	5.466	threading_6	CIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGIASCSYEARQLGIKNGMFFGHAKQLCPNL--QAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAELTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKP-----DGQYHLKP-EEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFRGLDDRPVRT-EKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVPTN--------------------------------------------------------------------
7	SP3	1jx4a	0.243	0.780	5.672	threading_7	IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVEDSGAVATANYEARKFGVKAGIPIVEAKKILPNA---VYLPRKEVYQQVSSRINL-LREYSEKIEIASIDEAYLDISDKVRDREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAAD-AKPNG------IKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGIGEAKAKYLISLARDEYNEPIRTR--VRKSIGRIVTK-RNSRNLEEIKPYLFRAIEESYYKLDKRI--PKAIHVVAVTEDLDI------VSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI-----------------------------------------------------------------------
8	SAM-T99	3fdsA	0.245	0.813	4.660	threading_8	IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVSGSGAVATANYEARKFGVKAGIPIVEAKKILP--NAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIK------VIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGAKAKYLISLARDEYNEPIRT--RVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKL--DKRIPKAIHVVAVTEDLD------IVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI-----------------EAIGLDKFFD--------------------------------------------
9	MUSTER	3bq1A	0.225	0.789	2.436	threading_9	IVIFVDFDYFFAQVEEVLNPQYKGKPLVVCVYTSGAVATANYEARKLGVKAGMPIIKAMQIAPS--AIYVPMRKPIYEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNKGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSKPN-----GLGVI-RPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGAKALYLLKLAQNKYSEPVE--NKSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKV---NGIPMRITVIAIMEDLDI------LSKGKKFKHGIS-IDNAYKVAEDLLRELLDKRRNVRRIGVKLDNIIIN---------------------------------------------------------------------
10	SPARKS	3gqca	0.212	0.818	5.383	threading_10	CIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRRAEIASCSYEARQLGIKNGMFFGHAKQLCP--NLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHL------KPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFPKTGQMLYRFCRGLDDRPVRTEKE-RKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVPGAPVETAKFGGARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVPTN--------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.679 to 3bq1A SCOP code=d.240.1.1	TM-score=0.678 to 3bq1A SCOP code=d.240.1.1	TM-score=0.693 to 1t3nA SCOP code=d.240.1.1	TM-score=0.664 to 1t3nA SCOP code=d.240.1.1	TM-score=0.678 to 3bq1A SCOP code=d.240.1.1