Template-based Modeling Results for ULAA_ECOLI

Submitted Primary Sequence

>Length 465
MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA
332012001000220022010000000000000223212200300010000000020001001200210021012011031211212000110022002010100000000000000000023022020000000000000000000000001211100000000000000000200230022015111000000000000001100211233332132030132021023111000100000000001201130022013321000100100000000000001001100220020020003200220010010000021011010001000000000000001001000000000000001200000001321011000000001000100000000200000000010000000000010010000000000000000012111300202210342233335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA
1	SPARKS	3naza	0.126	0.901	1.164	threading_1	YQNEVDILDW------KKPEAF-------------SDEMRPVQHALQTMEGVVIL-FDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHIVAWLAGVALPLCRKRRIDVVTIFTT-HATLLGRYLVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEHLLKRNVIKFQLHALKKEKINDFVRGHFHGCDFDLDNTLY-----FFKNKGADMFIEALARLNYRLKVSGSKKFIVMPAKNNSFGQAEVRALENTVHEVTTSIGKRIFDHALKSSDKVMLKRRIEGQLPPI-VTHNMVDDAND-------LILNKIRQVQLFNSPSDRVKMIGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSIGFGSYMEDLAKDYGYIVDRRFKAPDESVEQLVDYMEEFV------------KKTAAQAINQRNRTERLSDLLD
2	PROSPECT2	1jdha	0.084	0.920	2.066	threading_2	IRAIPELTKLLND---EDQVVVNKAAVMVHQLSKKEASRHAIPQMVSAIVRTMQNTNDVETARCTAGTLHNL------------SHHREGLLAIFKSGGIPALVKMDSVLFYAITTLHNLLLHQEGA-------KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILIILASGGPQALVNIMRTYTY------EKLLWTTSRVLKVLSVCSSNKPAIVEMQALGLHLTDPSQRLVQNCLWTLRNLSMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI---------RNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRLFVQLLYSPIENIQRVKEAAEAIEAEGA
3	PPA-I	1b3uA	0.077	0.897	1.440	threading_3	ERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPTVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLE----------LDNVKSEIIPMFSNLASDEQLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKS---WRVRYMVADKFTELQKAVG--PEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSLPCIKELVSDAN---QHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKD------------------ECPEVRLNIISNLDCVNEVIGIRQLSQ--SLLPAIVELA----------EDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEV
4	SPARKS	3rsza	0.121	0.925	1.040	threading_4	YQNEVDILDW------KKPEAF-------------SDEMRPVQHALQTMEGVVIL-FDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHIVAWLAGVALPLCRKRRIDVVTIFTTGRYLCCLESVVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEHLLKRDGIKFQLHALKKEKINDFVRGHFHGCDFDLDNTLYAGRYEY-KNKGADMFIEALARLNYRLKVSGSKKFIVMPAKNNSFGQAEVRALENTVHEVTTSIGKRIFDHAIKSSDKVMLKRRIEGQLPPI-VTHNMVDDAND-------LILNKIRQVQLFNSPSDRVKMIGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-----PSITTNVSGFGSYMEDLA-KDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTAAQAINQRNRTERLSDLLD
5	PROSPECT2	1b3ua	0.097	0.953	2.007	threading_5	LYPIAVLIDELIALALGVERTRSELLPFL--TDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESL---------ATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFADNVKSEIIPMFSNLASDEQ---DSVRLLAVEACVNIAQLLPQED--LEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTMKDCEAEVRAAASHKVKEFCEENVIMSQILPCIKELIEHLLPLFLAQLKDECPEVNLDCVNEVIGIRQLSQSLLPAIVELAYMPLLAGQLGVEFFDEKLNSLC-----MAWLVDHVYAIREAATSNLKK-LVEKFGKEWAHATIIPKVLAMSGDMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNSTLQSEVKPILA
6	PPA-I	3dh4A	0.113	0.892	1.330	threading_6	LPWWAVGASLIAANI---SAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFL--PIFIEKGIYTIPEFVEKRFN------------KKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPL-----MYSILGLALFALVYSIVV-------WTDVIQVFFLVLGGFMTTYMAVSFIGGTDG---------WFAGVSKMVDAAPGHFEMILDQSNPQYMNL---PGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDS---------GDHKLVNVGRTAAVVALIIACLIAAFQYIQEYTGLVSPGILAVFLLGLFSKGAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVV
7	PROSPECT2	1w63A	0.086	0.953	1.906	threading_7	MEMIQKECAAIRSSFREEDNRCRNVAKLLYMHMLGYPAHFGQLECLKLIIGYLGAMLLLDERQDVHLLMTNCIKNDLN-----HSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLV-----RILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTNVGNAILYETVLTIMDIKSESGLRVLANNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVSIKRRAMELSFALVNGN------------NIRGMMKELLPEFKADCASGIFLAAEKYAPSKRWHIDTIMVRDDAVPNLIQNSVEMHAYTVQRLYKAILGPLVQVAAWCIGEYGDLLVSGQCEEEDEVLDILESVLSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIEK
8	PPA-I	3zuxA	0.110	0.647	1.115	threading_8	---------------------------------------------------------------------------------------NILSKISSFIGKTFSLWAALFAAAAFFA-----PDTFKWA-----GPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKL--LNLPAEIAVGVILVGCC----------------PGGMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM--LEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALP-----------------LVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGYDAQKALTIEVGM-----QNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-------------------------
9	PROSPECT2	3a6pA1	0.092	0.892	1.880	threading_9	VNALCEQLVKAVTVMMDPNSFCEEFCVPCGLRLAEKTQVAIVLQILEHVVKFRWNGMSRLEKVYLKNSVMELIAN--GTLNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGET---------QTELVMFILLRLAEDVVTFQTLPPQRRRDIIFSFLLNTLQENVNKYQQVKTDTSQE---SKAQANCRVGVAALNTLAGY------IDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKPLMVLFGDVAMHYILSAAYVFLKRLCQVLCALGNQLCALLGADSDVETP------------------SNFGKYLESFLAFTTHPSQFLRSSTQMTWGA------LFRHEILSRDPLLLAIIPKYLRASMTNLV-----KMGFPSKTDSPSCEYSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQL-STF
10	PPA-I	3g61A4	0.107	0.662	1.082	threading_10	-------------------------------------------------------------------------------------------------GLTLVILAISPVLGLSAGIWAKILSSF----------TDKELHAYAKAGAVAEEVLAAIRTVIAFGKELERYNNNLEEAKRLGIKKAITA-NISMGAAFLLIYASYALAFWYGTKEYSLDEDVPPASFWRILKLNSIFCAIINGGLQPAFSVIFSKVVGVFTNGGPP---ETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEI--------------------LTKRLRYMVFKSMLRQDV----------------SWFDDPKNT----------TGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEK

Predicted Tertiary Structure


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TM-score=0.550 to 2q6hA SCOP code=f.54.1.1	TM-score=0.537 to 2bfwA SCOP code=c.87.1.8	TM-score=0.673 to 1wa5B SCOP code=a.118.1.1	TM-score=0.752 to 1b3uA SCOP code=a.118.1.2	TM-score=0.611 to 2q6hA SCOP code=f.54.1.1