Template-based Modeling Results for UIDB_ECOLI

Submitted Primary Sequence

>Length 457
MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN
5543122311000000100000000000000000001001000000000000010010000000020011121421412000000000000000000111231120010000000000000000000000000012113223111200001000100000000000000022123332100110000000000000000003223332242223221220121033132000000000000000000000000001100211100000000000000000000010012301321000000000000000001011210000000000000010000000000001002101122112220000000000110010000000000000001113322223011002000000000000000000210302331033002102323533332223225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN
1	MUSTER	1pv6A	0.129	0.880	1.419	threading_1	M---LKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL----GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSN-----FGRARMFGCVGWALGASIVGIMFTIN----NQFVFWLGSGCALILAVLLFFA--ATVANAVGANHSAFS-LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA--TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVCFCFKQLAMIFMSVLAGNMYESIG-----------FQGAYLVLGLVALGFTLISVFTLS----GPGPLSLLRRQVNEVA------------
2	SPARKS	1pw4a	0.100	0.899	2.568	threading_2	IDPTYRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN------PRVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHA--ALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKFRGNRGATGVFFMTLVTIATIVYNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD--------------GGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP--------------
3	PROSPECT2	1pw4A	0.117	0.897	2.332	threading_3	HKARLP-AAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-----FLPAGLILAAAVMLFMGFVPWATSS---IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAA--LYMPAFCAILVALFAFAMMRDTPQSPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAVGYTVDFFGW--------------DGGFMVMIGGSILAVILLIVV----------MIGEKRRHEQLLQEL----VP
4	PPA-I	1pv6A	0.116	0.906	1.673	threading_4	-MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL----GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKV---SRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSF--ATSALEVVILKTLHMFEVPFLLVGCFKYITSQFE------VRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIG-----------FQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA----------------
5	HHPRED-l	3o7q_A	0.117	0.845	4.860	threading_5	---RSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK----LSYKA-GIITGLFLYALGAALFAEIM-------NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-SSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHSLVLSVQTPYMIIVAIVLLVALLILTKFPALQSDNHKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA--GGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD--------TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPTA---------------ELIPALCFAVIFIFARFRSQT---------------------------
6	HHPRED-g	3o7q_A	0.117	0.845	4.278	threading_6	---RSYIIPFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK----LSY-KAGIITGLFLYALGAALFAE-IMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHSLVLSVQTPYMIIVAIVLLVALLILTKFPALQSDNDKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG--GHVGL-IALTLCSAFMSIQYPTIFSLGIKNLG-------QD-TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPT---------------AELIPALCFAVIFIFARFRSQT---------------------------
7	SP3	1pw4a	0.115	0.891	2.491	threading_7	HKARLPIDPTYRRLRWQIFLGIFFGYAAYYFALAMPYLQGFSRGDLGFALSGISIAYGFSKFIMGSVSD----RSN--PRVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN------DWHAALYMPAFCAILVALFAFAMMRDTPQSCKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD-----------GGFMVMIGGSILAVILLIVVMIGE---KRRHEQLLQELVP--------------
8	SAM-T99	3o7pA	0.164	0.825	0.896	threading_8	-----------LFFLWAVANNLNDILLPQFQQAFFQAGLIQSAFYFGY---------FIIPIPAGILMKKLSYKAG-----IITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFR-LNLAQTFASFGAIIAVVFGQSLILSNVPHQSQDVVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA---GGHVGLIALTLCSAFMSIQYPTIFSLGIK---------NLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTA---------------LIPALCFAVIFIFARFRSQT---------------------------
9	MUSTER	1pw4A	0.123	0.886	1.406	threading_9	HKARLP-AAEIDPTYRRLRWQIFLGIFFGYAAYYLVRK-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-----RVFLPAGLILAAAVMLFMGFVPWATSS---IAVMFVLLFLCGWFQGMGWPPCGRTMVH---SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND----HAALYMPAFCAILVALFAFAMMRDTPQSCPPIEEYKAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFG-----------WDGGFMVMIGGSILAVILLIVVMIG---EKRRHEQLLQELVP--------------
10	SPARKS	1pv6a	0.137	0.895	2.430	threading_10	-MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLR----KYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSN--FEFGRARMFG-CVGWALGASIVGIMFTI----NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIAPLIINRIGGKNALLLAGTIMSVRIIGSSFA--TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVFCFFKQLAMIFMSVLAGNMYESIGF-------QGAY--------LVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA------------

Predicted Tertiary Structure


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TM-score=0.921 to 1pv6A SCOP code=f.38.1.2	TM-score=0.887 to 1pw4A SCOP code=f.38.1.1	TM-score=0.883 to 1pw4A SCOP code=f.38.1.1	TM-score=0.882 to 1pw4A SCOP code=f.38.1.1	TM-score=0.944 to 1pv6A SCOP code=f.38.1.2