Template-based Modeling Results for UHPB_ECOLI

Submitted Primary Sequence

>Length 500
MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV
44311120010000000000000000000110122010000000000100000100311000000000000000011111121110000000100000000213223201000110000000000100111121330000000100000000000000010001120120032101210110020000000000000001100122001000000000000001000000000000000001100211231111000000010000000010022022112112311220220032013112221320022002300200000101000023112332203300220231022002101300130112313311033002100310233132020201033332201330100001001200110041040200102011234200010111111012221330000100110023020202020440010102002434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV
1	MUSTER	3gigA	0.218	0.422	1.413	threading_1	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKD--ELINIKQILEAA-----DIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENS-FSHGLLGMRERLEFANGSLHIDTENGTKLTMAIPNN--
2	PROSPECT2	1b3ua	0.106	0.888	2.208	threading_2	LSTIALRTRSELLPFLTDEVLLALAEQLGTTLVGGPEYVHCLLPPLESL-----ATVEETVVRDKAVESLRAISSPSDLEAHFVPLVKRFTSRTSACGLFSVCYPRVSSAVKAELRQYFRAASKLGEFAKVLELDNVKSEIIPMFSNLAACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVIMGLSPILGKDNTIEHLLPLFLAQPEVRLNIISNLDCVNEVIRQLSQSLLPAIVELAEDARLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVAIREAATSNLKKLVEKFGKEWAHATIIPKCINVLSEVCGQDI---------------TTKHMLPTVLRMAGKSLQKIGPILDNSTLQSEVKPILEKL-----------------TQDQDVDVKYFAQEA-------------------LTVL
3	PROSPECT2	1jdha	0.095	0.860	2.166	threading_3	SPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPV----DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPLGLHLTDPSQRLVQNCLWTLRNLSLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILADVHNRIVIRG--------LNTIPLFVQLLY----------------SPIENIQRVAAGVLCELAQKEAAEAIEAEGATAPLTELLHSRN------------------------EGVATYAAAVLFRMS------------------
4	SPARKS	3ehfa	0.225	0.346	2.906	threading_4	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIARDLHDTLGQKLSLIGLKSDLARKLIYDPEQAARELKSVQQTARTSLNEVRKIVSSKGIR------LKDELINIKQILEAADIFI----YEEEKWPENISLLNENILSCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG------EHGLL-GRERLEFANGSLHIDTENGTKLTA-IPN---
5	PPA-I	3gigA	0.218	0.422	2.034	threading_5	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKD--ELINIKQILEAA-----DIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENS-FSHGLLGMRERLEFANGSLHIDTENGTKLTMAIPNN--
6	PROSPECT2	1w63A	0.120	0.934	2.118	threading_6	MPAPAHFGQLECLKLIAFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRK------LVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTRRAMELSFALRGMMKELLYFLDSCEPEFKADCASGIFLAAKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQP-LVQVAAWCIGEYGDLLVSGQ--CEEEEPIQVTEDEVLDILESVLIYALTAIMKLST------------------------RFTCTVNRGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEK
7	HHPRED-l	2c2a_A	0.198	0.424	3.559	threading_7	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN--------VTESKEL-ERLKRI-DRMKTEFIANISHELRTPLTAIKAYAETIYNSLLDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLINREKVDLCDLVESAVNAIKESSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDYVKVILDEKDGGVLIIVEDNGIGIPDHA--TGLGLAITKEIVELHGGRIWVESGKGSRFFVWIPKDR-
8	HHPRED-g	3ehh_A	0.234	0.368	3.762	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NERIAEL------VKLEERQR-ARDLVDTLGQKLSL-GLKSDLARKLIYDPEQAARELKSVQQTARTSLNEVRKIVSS-KGIRL-----KDELINIKQILEA--ADI-FIYEEEKWPENISLLNENILS-CLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG-------HGLLG-RERLEFANGSLHIDTENGTKLT-AIPN---
9	SP3	3ehfa	0.225	0.346	2.684	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIARDLHDTLGQKLSLIGLKSDLARKLIKDPEQAARELKSVQQTARTSLNEVRKIVSSKGIRLKDELINIKQILEA----------ADIFIYEEEKWPENISLLNENILSCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG------EHGLL-GRERLEFANGSLHIDTENGTKLTA-IPN---
10	PROSPECT2	1qgra	0.104	0.964	2.110	threading_10	MERAAVENLPTFLVELSRVLAVAAGLQIKNSLTSKANARREVKNYVLHTIACAEIPVNQWPELIPEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIDDWNPCKAAGVCLMLLATCCEDDVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGWAFSSLAEAAYEFELIVQKLLETYPAVQKTTLVIMERLQQVLSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGILSVFGDIALAIGGEFKKYLEVVASQAQVDKSDYDMVDYLNELREEAYTGIVQGLKGD------------------QENVHAGDEDHTDGVAAGLIGDLCTAFGKDVLKLVEARPMIHELLTENQA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.475 to 1ys3B SCOP code=d.122.1.3	TM-score=0.757 to 1b3uA SCOP code=a.118.1.2	TM-score=0.473 to 1ys3B SCOP code=d.122.1.3	TM-score=0.869 to 1b3uA SCOP code=a.118.1.2	TM-score=0.698 to 1wa5B SCOP code=a.118.1.1