Template-based Modeling Results for UGPA_ECOLI

Submitted Primary Sequence

>Length 295
MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ
5533322122100000000000000000100000100000011021111102000020001002022002000000100000000010000000010222130120000000000000000000001000111200001001200010110210000000000000021000000000000220132001003012011021012000110000000000000010002001000000220122011000010022002111100000000000000000000002112233334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ
1	MUSTER	2r6gF	0.288	0.942	2.651	threading_1	MSSLRQFSGTQPL-YTL---TLTKYRPNNQIGFYQSITANWGDEKLSPGYTVTTGWKNFTRVFTDEPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRYTDLLVNYTYRIAFEGQDFGLAAAIATLIFLLVGALAIV------------
2	SPARKS	3fh6f	0.281	0.990	8.742	threading_2	LFAITTLILSSAGLYIYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTQEVLLKNFTRVFTDEPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNF-NNFVLIQLLTNGGPDRYTDLLVNYTYRIAFEGQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD--
3	PROSPECT2	2r6gF	0.280	0.956	2.972	threading_3	DALKWSVLGLLGLLFAITTLILSSAGLYIFYPAQEVLTANWGDEKLSPGYTVTTGWKNFTRVFTDEGFLAIFVWTVVFSLITVFLTVAVGMVLACLVQEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFN-FNNFVLIQLLTNGGPDRYTDLLVNYTYRIAFEGGDFGLAAAIATLIFLLVGALAIV------------
4	PPA-I	2r6gF3	0.308	0.671	9.562	threading_4	----------------------------------------------------------------DEPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWELRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDGYTDLLVNYTYRIAFEGGGG--------------------------------
5	HHPRED-l	2onk_C	0.179	0.851	6.702	threading_5	--------MRLLFSALLALLSSI-ILLFVLLPVAATVTLQ------------LFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSS-GLIGSFS---PLKF------VDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARG-ISEFGAVVVIA-YYP----MIAPTLIYER-YLSEGLSAAMPVAAILILLSLAVFVA-LRIIVG-----
6	HHPRED-g	2onk_C	0.179	0.851	6.071	threading_6	--------MRLLFSALLALLSSI-ILLFVLLPVAATVTLQ------------LFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSS-GLIGSFS---PLK------FVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARG-ISEFGAVVVIA-YYP----MIAPTLIYER-YLSEGLSAAMPVAAILILLSLAVFVA-LRIIVG-----
7	SP3	3puvf	0.289	0.949	6.528	threading_7	MSSLR-QFSGTQPLYTLDGDGTLTNNQVKYRPNNQIGFYQSINWGDEKLSTVTTGWKNFTRVFTDEPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWELRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNF-NNFVLIQLLTNGGPDGYTDLLVNYTYRIAFEGQDFGLAAAIATLIFLLVGALAI-------------
8	SAM-T99	2r6gF	0.289	0.858	7.104	threading_8	-----------------------------QIGFYQSITANWGDEKLSPGYTVTTGWKNFTRVFTDEPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFA-FNFNNFVLIQLLTNGGPDGYTDLLVNYTYRIAFEGQDFGLAAAIATLIFLLVGALAIV------------
9	MUSTER	2r6gF3	0.310	0.668	2.131	threading_9	----------------------------------------------------------------DEPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNN-FVLIQLLTNGGPDRYTDLLVNYTYRIAFEGG--G-------------------------------
10	SPARKS	3puyf	0.295	0.908	8.235	threading_10	MSSLRQTLTNNQSGV-------------KYRPNNQIGFYQSINWGDEKLSTVTTGWKNFTRVFTDEPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWELRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNF-NNFVLIQLLTNGGPDGYTDLLVNYTYRIAFEGQDFGLAAAIATLIFLLVGALAI-------------

Predicted Tertiary Structure


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TM-score=0.792 to 2r6gF SCOP code=e.70.1.1	TM-score=0.792 to 2r6gF SCOP code=e.70.1.1	TM-score=0.780 to 2r6gF SCOP code=e.70.1.1	TM-score=0.788 to 2r6gF SCOP code=e.70.1.1	TM-score=0.800 to 2r6gF SCOP code=e.70.1.1