Template-based Modeling Results for UBIE_ECOLI

Submitted Primary Sequence

>Length 251
MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
55333332122113212332113101300210031010001001101110012000100113412100000000010002003102320200000002200210121034221222021010103202133210000000000210212220020004003320100001013121310120000001200020020113123002100300321123310120034011210201101000000020113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
1	MUSTER	3dtnA	0.193	0.869	2.146	threading_1	LSE---------------------IKRKFDAVSGKYDEQRRKFIPCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRG---NLKVKYIEADYSKYDF-EEKYDMVVSALSIHHLEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSG--LTEEEIAAGYLDKDI----EMNQQLNWLKEAGFRDVSCIYKYYQ-FAVMFGRKT
2	SPARKS	3sm3a	0.230	0.781	3.284	threading_2	--------------------------------------------------LDLYPIIHNYLQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDRSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGE--TEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGF
3	PROSPECT2	3dlcA	0.165	0.845	3.464	threading_3	GSENKKK---------------------FDKKGAKNDEISKTLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHNEIALKNIA-DANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF-------------GNKELRDSISAEIRKNPDWKEFNRKNIS-QENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDI
4	PPA-I	3dlcA	0.165	0.845	2.400	threading_4	---------------------GSENKKKFDKKGAKNDEISKTLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHNEIALKNIADA-NLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGN-------------KELRDSISAEIRKNPDWKEFNRKNISQ-ENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDQ
5	HHPRED-l	1im8_A	0.181	0.837	1.552	threading_5	----------FIFD--------ENVAEVFPD-IQGYSNIITAIG----------L-AERFVTADSNVYDLGCSRGAATLSARRNIQPNVKIIGIDNSQP-VERCRQHIAAYHSEIPVEILCNDIRH--VEIKNAS-VILNFTLQFPEDRIALLTKIYEGLNPNGVLVLSEKFRFEDTKINHLLIDLHHQFKRANGYSELEVSQKRT-ALENV-RTDSIETHKVRLKNVGFSQVEFQCFNFGS----IAVK-
6	HHPRED-g	1im8_A	0.180	0.841	1.485	threading_6	----------FIFDE--------NVAEVFPD-IQRYSNIITAI----G-LAER------FVTADSNVYDLGCSRGAATLSARRNINPNVKIIGIDNSQP-VERCRQHIAAYHSEIPVEILCNDIRHVEIKNAS-VILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEKFRFEDTKINHLLIDLHHQFKRANGYSELEVSQKRTAL-ENV-RTDSIETHKVRLKNVGFSQVEFQCFNGS-IAVK-----
7	SP3	3sm3a	0.235	0.781	3.476	threading_7	-----------------------------------LD-LYPIIHNYL--------------QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDRSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETG--ETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGF
8	SAM-T99	3mggA	0.250	0.781	2.221	threading_8	----------------------------------------------------KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKN-VKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSHPEGKKAIEAWNCLIRSLVGRQIYPRVEPRVYIDSSKPELVDGFILKTIIPVEGVKIIKEEEWEKGIEELHKTAE-
9	MUSTER	3dlcA	0.167	0.837	2.140	threading_9	-----------------------ENKKKFDKKGAKNDEISKTLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHNEIALKNIADA-NLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF-------------GNKELRDSISAEIRKNPDWKEFNRKNISQ-ENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDQ
10	SPARKS	3dtna	0.193	0.869	2.690	threading_10	---------------------LSEIKRKFDAVSGKYDEQRRKFIPCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEK-YPEATFTLVDMSEKMLEIAKNRFRG---NLKVKYIEADYSKYDF-EEKYDMVVSALSIHHLEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSG--LTEEEIAAGYLDKDI----EMNQQLNWLKEAGFRDVSCIYKYYQ-FAVMFGRKT

Predicted Tertiary Structure


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TM-score=0.779 to 1im8A SCOP code=c.66.1.14	TM-score=0.671 to 1y8cA SCOP code=c.66.1.43	TM-score=0.662 to 1ve3B SCOP code=c.66.1.43	TM-score=0.670 to 1y8cA SCOP code=c.66.1.43	TM-score=0.675 to 1y8cA SCOP code=c.66.1.43