Template-based Modeling Results for UBIA_ECOLI

Submitted Primary Sequence

>Length 290
MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF
55432123101100200313200000000000000000012110201000000000000100000000002130113132023111121202331010000000000000000000000000000000000000033113101000000000000000000121110000000000000000000000010121015110200001113212100000000000000000001110100000000000000000210233213100200110100000000000000121
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF
1	PROSPECT2	3a0oA3	0.098	0.948	1.625	threading_1	AQTSLNSEQLSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMPERQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKAWDTKGATSRAYNDEAGFRVVVALAWGYDWLERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFL---------------ATLYSPWAGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFLKLGYNVRQFAGVTGNGHYQWYFDHIKAMAFYNYLNFDDLVYRHDYP
2	PROSPECT2	1ezfa	0.067	0.921	1.497	threading_2	NSLKTCYKYLNQAAVIQALDGEMVCIFYLVLRALDTLEDDMTIS---------------VEKKVPLLHNFHSFLYQ-----PDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADI-CRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVPENIDLAVQCLNELITNALVITYLSRLRNQSVFNFCAIPQVMAIATLAACDATNMPAVKAIIYQPSSSKTRQIISTIRT--QN
3	PROSPECT2	1ejlI	0.079	1.000	1.449	threading_3	REKQPPIDNIIKFVSFLGKTDCSPIQFESAWALTNIALLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVIVTPALRAIGNIVTGTDEQTQKVIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTIVYLVHCGIIEPLMNLLILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIKASLNLIEKYFS
4	PROSPECT2	1ee4a	0.090	0.997	1.441	threading_4	DDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNEQAIWALGNVAGDSTDYRDYVLQCNPILGLFNSNKPSLIRTATWTLSNLCWSVVSQALPTLAKLITETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINARLLLSSPKENIKITAGNTEQIQAVIKEACWAISNASSGGLQRPDIILDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFKAYKIIETY-F
5	PROSPECT2	3kb9A	0.094	0.959	1.438	threading_5	FPRQLHPETTRTWLLEKRLMPADKVEEYADGLYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRDSPGDHLHHEDTLVAGFADSVRRLYAFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRHWIWTDLLEPSSGCELPDAVRRAALLSQEFAAWYNDLCSLPKEIAG------------DEVHNLGISLITHHSLTLEEAIGEVRRRVEECITEFLAVERDALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFHH
6	MUSTER	3a0oA	0.138	0.997	0.807	threading_6	AQTSLNSEQLSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMPELWRQMYIDCQEVIYAIRHLAIAGRVLGRLDAAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSTVRSVLLERTREVADHVIAHARIVFPYDSHAVRSLSAVLTPACIALQGESEAGEWLDYTVEFLATLGWAPHYWMTGMAYLIEA-ANLIRSYIGYYQRPFFQNTGRFPLYTKAPGTRRANFGLKLGYNVRQFAGVTGHYQWYFDKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQ
7	SPARKS	2xwub	0.067	0.983	0.964	threading_7	SPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQA--VQNGDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAEQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWRIYRVDISDTLMYVYEMLELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIA---ETIDVNYSDVVPGLIGLSNVQLADTVMFTIGALSEW
8	PROSPECT2	1jdha	0.086	1.000	1.400	threading_8	EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAITMQNTNDVETARCTAGTLHNLVLFYAITTLHNLLLHQEGYGNQESKLIILASGGPYTYEKLLWTTSRVLKVLNCLWTLRNLSTLVQLINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLHAPLREQGAIPRLVQLLMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVVAAGVLCELAQ
9	PPA-I	3g61A1	0.103	0.934	0.962	threading_9	----------VSVLTMFRYAGWLDRLYMLVGTLAAIIHG------VALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAM---FAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIIGMFFQAMATFFGGFIIGFTRIGIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVAQSLQIPYRNAMKKAHVFGITFSFTQAMM
10	HHPRED-l	2xq2_A	0.155	0.821	0.626	threading_10	AKSVSEAQKGIVFAAFL---ALIVPFLVVLPGIAAYVISLPSAADVGVAIVSSLASMLNSTATIFTMDIYKEYISPD---------SGDHKLVNVGRTAAVVALIIAALIAPMLGIGCFYIGLPGILAFLLGLFWKKTTSKGAIIG-VVASIPFALFLKFMPLSMPFDQMLY---TLLFTMVVIAFTSLSTSDDDKGISVTSSMFVTDRSF-NIAAYGIMIVLAVLYTLFWVNAALIIFGVGVIGTILLISYGIK-----------------------------------

Predicted Tertiary Structure


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TM-score=0.415 to 1s35A SCOP code=a.7.1.1	TM-score=0.612 to 1j0nA SCOP code=a.102.3.2	TM-score=0.565 to 1vqrA SCOP code=a.211.1.3	TM-score=0.799 to 1ezfB SCOP code=a.128.1.2	TM-score=0.712 to 1t5jA SCOP code=a.209.1.1