Template-based Modeling Results for TTDT_ECOLI

Submitted Primary Sequence

>Length 487
MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL
5431220131000000000000010121032200100000000000000210210000000000000011122112221132213222320210021011100000000000000021000020001000320133110000000000000000000100100000000020001102222332222100000000000010000000001001000000002210322011010010000000000000000001013222421331221022113321321231010000000000000011221110000000000000021012111111301010000000000001001210001000300110122111000000000000001110001100000000000000220331111000000000000000001110000000100120201100100000000000000000100010122
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL
1	MUSTER	3dh4A	0.123	0.903	1.017	threading_1	L----PWWAVGASLIAANAEQFI----GMSGSGYSILAIASYEWMSAIT----LIIVGKYFLPIFIEKGI---YTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETIGIPLMYSILGLALF-VWTDVIQVFFLVLGGFMTTYMAVSFIGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQ--YIIQRTLVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSD-AATNLPSAANADKAYPWLTQFLPV-----GVKGVVFAALAAAIVS-----SLASMLNSTATIFTMDI--YKEYISPDSGTAAVVALIIACLIAPMLGGIG----AFQYIQEYTGLVSPGILAVFLLGLFW-----TTSKGAIIGVVASIPFALFLKFMMDQMLYTLLFTMVVIAFTSLSTS-DDDPKGI------VTSSMFVTDSFNIAAYGIMIVLAVLYTLFWVLYK
2	SPARKS	2xwub	0.087	0.940	1.007	threading_2	LLQQPSSPSCVRQKVLKCFSSWVQL--EVPLQDC---EALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQN-GDMETSHGICRIAVALGENHSRSFLALVNMIMFCTGIPSLTLTFWYTLQDDILS-FEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSY----SWQHTEALLYGFQSIA---------ETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVM-------INSVLPLVLHALGNPELSVS--SVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPKLAIVHILGLLSNLFTTLDISHPNPVVVVLQQVFQLIQKVLSKAQVVEAVCAIFEKSVKTLLDDFAPM
3	PROSPECT2	1jdha	0.062	0.897	2.213	threading_3	DEDQVVVNKAAVMVHQLS---------KKEASRHAIMPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGG--------IPALVKMLGSPVDSVLFYAITTLHNLLLHQRLAGGLQKMVALLNKTNVKFL--AITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTY----------EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS-----------DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL------TCNNYKNKMMVCQVGGIEAL----VRTVLRAGDREDITEPAICALRHLMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIQRVAAGVLCELAQDKEAAEAIGA
4	PROSPECT2	1w63A	0.084	0.951	2.085	threading_4	MRTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFHTSVVLLTEMCERSPDMLAHFLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMGLRVLAINILGRFLLNNDKNIRYVALTSLLKT-------VQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSF-----------ALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEE------EPIQVTEDEVLDILESVVTRGYALTAIMKLSYNALFKK
5	PROSPECT2	1qgra	0.076	0.998	2.072	threading_5	MEAVENLPTFLVELSKNYVLHTLGTETYRPSSAEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNNFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMLFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEAKGALQYLVPILTQTLTKQDENDDDDCKAAGVCLMLLATCCEDDIVAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEIVQKLLETTDRPDGHQNNLRSSAYESVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHINDLQSLLCATLQNVLRKVQVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYMEAFGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLEN-LGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLAQVDKSDYDMVDYLNELRESCLEAYTGIVQGILSFIQA
6	PROSPECT2	1b3ua	0.094	0.963	2.065	threading_6	AAASTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLV--GGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFGDWFTSRTSACGLFSVCYPRVSVKAELRQYFRNLCSDDTPMVRR--AAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLEDLEALVMPTLRQAAEDKSWRVRYMVAD-------KFTELQK-AVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELV----SDANQHVKSALASVIMGLSPILGKDNTIEKDECPEVRNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQL--GVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVVRFNVAKSLQKIGPI
7	PROSPECT2	2bkuB	0.078	1.000	2.029	threading_7	MSNFLQFAGLSSQVLILAALTLKNELVSKDSVKTNAAAQLIAAIADIELPEQPENVKRASLLALGYMCESADALVSSSNSTETSKAVRLAALNALADSLIFAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYEALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNGSIMDGPDKVQRIADSVAESIDPQQHLPGVVQACLIGLNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISVLAQMISNPNARRELKPAKPENGTLEALDYQIKVLEAVLDAYVGIVAGTIFQFISL
8	MUSTER	1ialA	0.088	0.860	0.934	threading_8	MLKRRNV---TVNWSVEDIVKGINSNN---LESQLQATQAARKLLS---EKQPPIDNIIRAGLIPKFVSFLGKTDCSPI-----------QFESAWA----LTNIASGTSEQTKAVVDGG----AIPAFISLLASPHAHISEQAVWALGNIAG---GSAFRDLVIKHGAIDPLLALLAVPDLSTLA---------CGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPT---LVRLLHHNDPEVLADSCWAISYLTD------GPNERIEMVVKKGVVPQ--LGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKE-ATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSK-----ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGEKLSIMIEECGGLDKIEALQ-----ESVYKASLNLIEKYF------
9	SPARKS	2x1gf	0.092	0.984	0.928	threading_9	GYTIEGCVTITAVLLEVVHKCYWPCIHGMTADENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEIIVHIYMLFVSSVERHSTLLLSGITSADPELSI-LVHRIVQEILHCTDKPTMALAFWYMLQDEVFA---HKCWEYIKPLYAHLTRILVRKSEQPDEKSLAKDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIALQRHPTHWTKLEACIYSFQSVQIPRLMRVL--AEIPYEKLNVKLLGTALETMGSY--CNWLMYIPPAINLLVRGLNSSMSAQATLGLKELCRLQADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRIVSPCFEELQAICQATPAARIRTIFRLNMISTLFSSLNTPVLLVMTMPIFKRIAEMWVEEIDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFQCCAPTLEISKTAIVMKPLMQQLLREFIQHSFKL
10	PROSPECT2	1gw5b	0.085	0.897	1.970	threading_10	TNKKGEIFELKAELN-------NEKKEKRKEAVKKVIAAMTSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAI---------MAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNE----------CTEWGQIFILDCLSNYNPKDDREAQSICERVSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEI-----------------LKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVD-----VDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWINADELLVQLTLLTAIVKLFLV

Predicted Tertiary Structure


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TM-score=0.562 to 2q6hA SCOP code=f.54.1.1	TM-score=0.562 to 2q6hA SCOP code=f.54.1.1	TM-score=0.572 to 1m8xA SCOP code=a.118.1.8	TM-score=0.645 to 1wa5B SCOP code=a.118.1.1	TM-score=0.746 to 1b3uA SCOP code=a.118.1.2