Template-based Modeling Results for TSGA_ECOLI

Submitted Primary Sequence

>Length 393
MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH
552121111000000000000000000010012003102120200000000000010000000010021021210010000000000000010310000000000000000000000001000102333301210002000000000000000000231121100000000000000001000302202432342323233341100000000000010000000010012003202020320020001000010000000000020010110000000000000000122211000100000000000001000100122132222300100000011010001000000132110100000010000000000000000233333422334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH
1	MUSTER	1pw4A	0.138	0.997	2.318	threading_1	LPARLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFTSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFACGLPPIEEYKNDTAKQIFMQYPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAKKAAGTAAGFTGLFGYGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQEL
2	SPARKS	3o7pa	0.182	0.952	3.158	threading_2	---RSYIIPFALLCSLFFLWAVANNLNDIL----LPQFQQAFFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFASFGAIIAVVFGQSLILSNVPVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSAARIRWRWAVLAQFCYVGAQTACWSYLIRYAVEEGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAG---NIPTAELIPALCFAVIFIFAR-FRSQT-------
3	PROSPECT2	1pw4A	0.120	0.997	2.532	threading_3	FKRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAMMRDTPQSCGLPPIEEYKNDTAKQNKLLWYIAIANVFVYLLRYGILDWSPTYLKEKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQEL
4	PPA-I	1pw4A	0.138	0.997	3.638	threading_4	TYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFARDTPQSCGLPPIEEYKNDTAKQNKLLWYIAIANVFVYLLRYGILDWSPTYLKEKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAKKAAGTAAGFTGLFGYGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQEL
5	HHPRED-l	3o7q_A	0.173	0.957	5.567	threading_5	---RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNHSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDKQGSFSAARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEIGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLSAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVMTIIGGGIVTPVMGFVSDAGNIPTAELIPALCF----AVIFIFARFRSQT--------
6	HHPRED-g	3o7q_A	0.172	0.949	5.283	threading_6	---RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNSVQTPYMIIVAIVLLVALLIMLTK-FPALQSDNHSKQGSFLSRARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEIGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALISAFA-GGHVGL-IALTLCSAFMSIQYPTIFSGIKNLGQD-TKYGSSF-IVMTIIGGGIVTPVMGFVSDAGNIPTAELIPALCFAVIFIFA----RFRSQT--------
7	SP3	3o7pa	0.185	0.949	3.020	threading_7	---RSYIIPFALLCSLFFLWAVANNLNDIL----LPQFQQAFFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA-LFWIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFASFGAIIAVVFGQSLILSNVPVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSAARIRWRWAVLAQFCYVGAQTACWSYLIRYAVEEGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAG---NIPTAELIPALCFAVIFIFARF-RSQT-------
8	SAM-T99	3o7pA	0.176	0.941	5.781	threading_8	-----YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFF----QAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFASFGAIIAVVFGQSLILSNVSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTI-IGGGIVTPVMGFVSDAAGNIPTELIPALCFAVIFIFARFRSQ-------------
9	MUSTER	3o7pA	0.180	0.949	2.304	threading_9	---RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAF----FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFASFGAIIAVVFGQSLILSNVPVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVMTIIGGGIVTPVMGFVSDAAGIPTAELIPALCFAVIFIFARF-----RSQT-------
10	SPARKS	1pw4a	0.138	0.995	3.072	threading_10	IDRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFTSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMDTPQSCGLPPIEEYKNDTAKQNKLLWYIAIANVFVYLLRYGILDWSPTYLEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAKKAAGTAAGFTGLFGYGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK-RRHEQLLQE

Predicted Tertiary Structure


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TM-score=0.914 to 1pw4A SCOP code=f.38.1.1	TM-score=0.918 to 1pw4A SCOP code=f.38.1.1	TM-score=0.617 to 1pv6A SCOP code=f.38.1.2	TM-score=0.906 to 1pw4A SCOP code=f.38.1.1	TM-score=0.902 to 1pw4A SCOP code=f.38.1.1