Template-based Modeling Results for TRUC_ECOLI

Submitted Primary Sequence

>Length 260
MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS
CCCEEEECCCEEEEECCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS
42200011220000020110000201212311000010022321310100020133000000001123003200310353312120000010113331101110132234212100124431320000010011022212224232220000100022123100010001040000011311224213201331203110010110102012121202020201410120031011322123322121212222324235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS
1	MUSTER	1xpiA	0.335	0.862	3.702	threading_1	LDVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRA---RFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYA-----------FATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEATGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR----------------------
2	SPARKS	1v9ka	0.336	0.846	5.497	threading_2	--DVIYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPE-ARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREK-GQKDYLALVRGQWQSHKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEER-----------YAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEATGLNRLFLHAAALKFTHPGTGE-VRIEAP-DEGLKRCLQKRNAR-----------------------
3	PROSPECT2	1v9kA	0.327	0.846	4.127	threading_3	--DVIYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPE-ARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREK-GQKDYLALVRGQWSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEER-----------YAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEATGLNRLFLHAAALKFTHPGTGE-VRIEAPDE-GLKRCLQKRN-----------------------AR
4	PPA-I	1xpiA	0.335	0.862	9.692	threading_4	ADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRA---RFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERY-----------AFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEATGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR----------------------
5	HHPRED-l	1v9k_A	0.336	0.846	6.491	threading_5	-DVI-YEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALR-PEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKG-QKDYLALVRGQWQSHVKVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEER-----------YAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEGTGLNRLFLHAAALKFTHPGTGEV-RIEAP-DEGLKRCLQK-R--NAR--------------------
6	HHPRED-g	1v9f_A	0.260	0.904	5.727	threading_6	PLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLLLHYYPPIAVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVH--PMGKPAVTHYRIMEHFR-----------VHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPGASTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL------------
7	SP3	1v9ka	0.336	0.846	5.192	threading_7	--DVIYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEA-RFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREK-GQKDYLALVRGQWQSHKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERY-----------AFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEATGLNRLFLHAAALKFTHPGTGE-VRIEAP-DEGLKRCLQKRNAR-----------------------
8	SAM-T99	1xpiA	0.346	0.835	6.634	threading_8	---ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRA---RFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYA-----------FATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKL--------------------------
9	MUSTER	2istA2	0.265	0.900	3.565	threading_9	ILDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVH--PMGKPAVTHYRIMEHF-----------RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDE-VDW------------
10	SPARKS	1prza	0.267	0.865	5.163	threading_10	PLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALLHYYPDVPRAGIVHRLDKDTTGL-VVAKTVPAQTRLVESLQRREITREYEAVAIGHTA-GGTVDEPISRHPTKRTH----AVHPGKPAVTHYRIEH------------FRVHTRLRLRLETGRTHQIRV-HAHITHPLVGDPVYGGRPRPAFISTLRKFDRQALHAT-LRLYHPISGI-EEWHAPIPQDVELIEVRADFEEHKDEVDWL--------------

Predicted Tertiary Structure


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TM-score=0.599 to 1vioA SCOP code=d.265.1.3	TM-score=0.601 to 1vioA SCOP code=d.265.1.3	TM-score=0.597 to 1vioA SCOP code=d.265.1.3	TM-score=0.597 to 1vioA SCOP code=d.265.1.3	TM-score=0.599 to 1vioA SCOP code=d.265.1.3