Template-based Modeling Results for TRER_ECOLI

Submitted Primary Sequence

>Length 315
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS
CCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS
553412131004203102100020124322123201310120043111100200100223122000000030300001100200120024221100002032223101300110233202000000121213200231400000001304201000001200021002100420020000000122322202210210020044150321001110223101200130033311000000010000002002424131000000010100300104001020101200210011002102333332111021224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS
1	MUSTER	1zvvA	0.224	0.994	2.986	threading_1	MN--VTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIASMYKYNIILSNSDQNQDKQLHLLNNMLGKQVDGIIFMSGNVTHVEELKKSPVPVVLAASIESTIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPSYIVEGDYTYDSGIEAVEKLLEEKPTAIFVGTDEMALGVIHGAQDRGPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVSSIVELPHRIE
2	SPARKS	1rzrg	0.234	0.965	3.348	threading_2	---NVTIYDVAREASVS-ATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIA-TYKYNIILSNSDQNQDKELHLLN-NLGKQVDGIIFSGNTEEHVEELKKSPVPVVLAASIESTIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPSYIVEGDYTYDSGIEAVEKLLEEDPTAIFVGTD-EALGVIHGAQDRGPNDLEIIGFDNTRLST-VRPQLTSVVQPY-DIGAV--ARLLTKYNKETVDSIVQLPHRIE
3	PROSPECT2	1vpwa	0.204	0.981	4.115	threading_3	-----TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSMKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPMLEEYRHIPMVVMDWGEAKADAVIDNAFEGGYMAGRYLIERGHREIGVIPGPL-ERNTGAGRLAGFMKAMEEAMIKVPIVQGDFEPESGYRAMQQILSHRPTAVFCGGDIMAMGALCAADEMGLQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREPQSIEVHPRLR
4	PPA-I	1zvvA	0.224	0.994	3.735	threading_4	MN--VTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIASMYKYNIILSNSDQNQDKQLHLLNNMLGKQVDGIIFMSGNVTHVEELKKSPVPVVLAASIESTIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLDSYIVEGDYTYDSGIEAVEKLLEEDPTAIFVGTDEMALGVIHGAQDRGPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSIVELPHRIE
5	HHPRED-l	2hsg_A	0.224	0.978	2.825	threading_5	---NVTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASK-TTTVGVIIP--SNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTEEHELKKSPVPVVLAASITNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPVRDVEGDYTYDSGIEAVEKLLEEKPTAIFVGTDEMALGVIHGAQDRGPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSIVQLPHRI-
6	HHPRED-g	2hsg_A	0.223	0.981	2.183	threading_6	-N--VTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASK-TTTVGVIIP--SNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTEEHELKKSPVPVVLAASIENQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLDSYIVEGDYTYDSGIEAVEKLLEEKPTAIFVGTDEMALGVIHGAQDRGPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSIVQLPHRIE
7	SP3	3kjxa	0.250	0.965	3.681	threading_7	---PLTLRDVSEASGVS-ETVSRVLRNRGDVSDATRARVLAAAKELGYVPNKIAGALASNRVNLVAVIIPSL-SNVFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEL-SWRPSGVIIAGLEHSEAAALDAAGIPVVEIDSDGKPVDAVGISHRRAGREA-QAILKAGYRRIGFGTKPLD--YRARKRFEGFTEVLGKNGVEIEFYSGGSALAKGRETQALERSPDLDFLYYSND-IAAGGLLYLLEQGPGQIGLAGFNNVELLQGLPRKLATD-ACRLEIGRKAAEIIAKRLEDPEIETRITLEPKIS
8	SAM-T99	1zvvA	0.221	0.990	3.630	threading_8	--MNVTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASKKTTTVGVIIPDISNIFYAELARGIEDIASMYKYNIILSNSDQNQDKQLHLLNNMLGKQVDGIIFMSNTEEHVEELKKSPVPVVLAASIETNIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPVYIVEGDYTYDSGIEAVEKLLEEKPTAIFVGTDEMALGVIHGAQDRGLNVPNIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKEVDSSIVELPHRI-
9	MUSTER	1jh9A	0.206	0.984	2.843	threading_9	----ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEAMLEEYRHIPMVVMDRGEAKFTDAVIDNFEGGYMAGRYLIERGHREIGVIPGPL-ERNTGAGRLAGFMKAMEEAMIKSWIVQGDFEPESGYRAMQQILSHRPTAVFCGGDIMAMGALCAADEMGPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKEEPQSIEVHPRLI
10	SPARKS	3kjxa	0.247	0.965	3.321	threading_10	---PLTLRDVSEASGVS-ETVSRVLRNRGDVSDATRARVLAAAKELGYVPNKIAGALASNRVNLVAVIIPSLSN-VFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEL-SWRPSGVIIAGLEHSEAAALDAAGIPVVEIDSDGKPVDAVGISHRRAGREA-QAILKAGYRRIGFGTKPLD--YRARKRFEGFTEVLGKNGVEIEFYSGGSALAKGRETQALERSPDLDFLYYSND-IAAGGLLYLLEQGPGQIGLAGFNNVELLQGLPRKLATD-ACRLEIGRKAAEIIAKRLEDPEAETRITLEPKIS

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.939 to 1zvvA TM-score=0.890 to native SCOP code=a.35.1.5	TM-score=0.940 to 1zvvA TM-score=0.891 to native SCOP code=a.35.1.5	TM-score=0.919 to 1zvvA TM-score=0.883 to native SCOP code=a.35.1.5	TM-score=0.897 to 1jh9A TM-score=0.917 to native SCOP code=a.35.1.5	TM-score=0.935 to 1zvvA TM-score=0.890 to native SCOP code=a.35.1.5

Experimental Structure

Download 1bykA

SCOP code=c.93.1.1