Template-based Modeling Results for TPX_ECOLI

Submitted Primary Sequence

>Length 168
MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA
CCCEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCEEEHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHCEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA
531202021220101322132123022010114322202012113121000000213122011002300310240340100000111121012002323031100011142130032010012213241000100000144110000100331322311310122145
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA
1	MUSTER	3i43A	1.000	0.994	4.185	threading_1	-SQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA
2	SPARKS	2yzha	0.395	0.994	4.016	threading_2	MARTVNLKGNPVTLVGPELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFR-YRDMEKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKE
3	PROSPECT2	3p7xA	0.451	0.976	3.652	threading_3	GSTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASKE-EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEEL---RLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN
4	PPA-I	3i43A	1.000	0.994	5.165	threading_4	-SQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA
5	HHPRED-l	1q98_A	0.634	0.976	2.378	threading_5	---TVTLAGNPIEVGGHFPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVLA-
6	HHPRED-g	1q98_A	0.634	0.976	2.912	threading_6	---TVTLAGNPIEVGGHFPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVLA-
7	SP3	2yzha	0.395	0.994	4.127	threading_7	MARTVNLKGNPVTLVGPELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFR-YRDMEKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKE
8	SAM-T99	2jsyA	0.415	0.976	3.720	threading_8	-MAEITFKGGPVTLVGQEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKE---LRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKA
9	MUSTER	1y25A	0.515	0.982	4.045	threading_9	-HSQITLRGNAINTVGELPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVSATSVRTFDERAAAS-GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRD-SFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGA
10	SPARKS	3keba	0.241	0.988	3.786	threading_10	-EDFWVQYGDELPVIGDFPRKGDYLPSF-LVDDQKHDAALESFSHTPKLIVTLLSVDEDEHLLLLRETRRFLDSWPHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQE

Predicted Tertiary Structure


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TM-score=0.970 to 1q98A TM-score=0.999 to native SCOP code=c.47.1.10	TM-score=0.970 to 1q98A TM-score=0.999 to native SCOP code=c.47.1.10	TM-score=0.926 to 1y25A TM-score=0.880 to native SCOP code=c.47.1.10	TM-score=0.930 to 1psqA TM-score=0.874 to native SCOP code=c.47.1.10	TM-score=0.970 to 1q98A TM-score=0.999 to native SCOP code=c.47.1.10

Experimental Structure

Download 3hvsA

SCOP code=c.47.1.10