Template-based Modeling Results for TONB_ECOLI

Submitted Primary Sequence

>Length 239
MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ
45231122100000000000000000001011332232222232221222232323333223333332233333333233334323222343434343434324423333443233232432232332222422222222222322221112232123232322231222423220201010244131210100214222201220120043122312332210101010103121325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ
1	MUSTER	1u07A	1.000	0.377	1.732	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------------ASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ
2	PROSPECT2	1mv3A	0.146	0.803	2.204	threading_2	-----------------------------------DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQKAGDV--VLVIPFQNPEEQDESDWNQHKKLEKCR----------GVFPENFTERVP
3	MUSTER	1mv3A	0.098	0.858	1.358	threading_3	-------------------------------DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDT-DVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCR--GVFPENFTERVP
4	SPARKS	2k9ka	0.300	0.418	2.201	threading_4	--------------------------------------------------------------------------------------------------------------------------------------DHPFTSAPTFGDFGSNQQAMPLYRVEPVYPSRALKRGVEGFVTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKKWKYQPQIVDGGQTVTVEFKIAK-----
5	PROSPECT2	2l3jA	0.071	0.824	1.684	threading_5	PGPVLPKNALMQLNKKKAKLHAAEKALRS-------------------FVQFPNASEAHLAMGRTLSVNTDFTSDQADFPDTLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPPLPIPPPFPPPSGKNPVMILNELRPGLKYDFLSESGE------SHAKSFVMSVVVDG----QFFEGSGRNKKLAKARAAQSALATVFNLHLLEHHH-------------HHH
6	PPA-I	2k9kA	0.290	0.418	2.202	threading_6	--------------------------------------------------------------------------------------------------------------------------------------DHPFTSAPTFGDFGSNQQAMPLYRVEPVYPSRALKRGVEGFVTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKKWKYQPQIVDGKQTVTVEFKIAK-----
7	PROSPECT2	2jl6J	0.092	0.544	1.527	threading_7	--------------------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------------------------------------------AAAAAAAA---------AAAAAAA
8	HHPRED-l	2grx_C	1.000	0.326	6.627	threading_8	-------------------------------------------------------------------------------------------------------------------------------------------------------------RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGT----
9	PPA-I	1mv3A	0.086	0.828	1.721	threading_9	-------------------------------DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDAGDVVLVIPFQNPEEQDEVKESDWNQHKKLEKCRGENFTERVP----------
10	HHPRED-g	2grx_C	1.000	0.326	6.113	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGT----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.649 to 1u07A SCOP code=d.212.1.2	TM-score=0.367 to 1mv3A SCOP code=b.34.2.1	TM-score=0.649 to 1u07A SCOP code=d.212.1.2	TM-score=0.569 to 1mv3A SCOP code=b.34.2.1	TM-score=0.510 to 1mv3A SCOP code=b.34.2.1