Template-based Modeling Results for THRC_ECOLI

Submitted Primary Sequence

>Length 428
MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ
CCEEECCCCCCCCCHHHHHHHCCCCCCCEEECHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCHHHHHCCEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ
33110223333311002000200032300000330130122102301512021000200010013302331022002201213010120422000010010120002100020001002201233210000011131000001001113202000000323113111200102121010000201021012002201322312211100001011000000000000200120233243200000010100100000002112000110000220120012013323223321311003002011121122012002210220331110002131022002103421100000000002002221342220000001110311300130032223123201322313211220222021023102424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ
1	MUSTER	1vb3A	1.000	1.000	3.437	threading_1	MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ
2	SPARKS	3v7na	0.284	0.995	8.261	threading_2	-NYISTRGAGERHTFSDILLGGLAKDGGLYLPSEYPQVSADELARWRTLPYADLAFEILSKFCDD-IAAADLRAITRRTYTADTPLTTLGTEVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKETLNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMSLQDPNIFNLAVNGVFDDCQDIVKAVSNDHAFKAQQKIGTVNSINWARVVAQVVYYFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGAYRVASNFERFVFDLLGRDPARVVQLFRDVEQDFARVAEFGSGRSTHADRIATIRDVFEYRTMIDTHTADGLKVAREHLRPGVPMVVLETAQPIKFGESIREALGQEPSRPAAFDGLEALPQRFEVVDANAQQVKDFIAAHT
3	PROSPECT2	3v7nA	0.277	0.995	5.314	threading_3	-NYISTRGAGERHTFSDILLGGLAKDGGLYLPSEYPQVSADELARWRTLPYADLAFEILSKFCDD-IAAADLRAITRRTYTAITPLTTLGTENSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHTLNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMYSLDPNIFNLAVNGVFDDCQDIVKAVSNDHAFKAQQKIGTVNSINWARVVAQVVYYFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGAYRVASNFERFVFDLLGRDPARVVQLFRDVEQARVAEFGFVSGRSTHADRIATIRDFERYRTMIDTHTADGLKVAREHLRPGVPMVVLETAQPIKFGESIREALGQEPSRPAAFDGLEALPQRFEVVDANAQQVKDFIAAHA
4	PPA-I	1vb3A	1.000	1.000	4.686	threading_4	MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ
5	HHPRED-l	1vb3_A	1.000	0.998	5.927	threading_5	MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNH-
6	HHPRED-g	1kl7_A	0.343	0.981	1.754	threading_6	QVYRSTRSSSPTISFEEAIIQGLATDGGLFIPPTIPQVDQATLNDWSKLSFQDLAFAI-RLYIAEEIPDADLKDLIKRSYSEVTPLVQNKENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQ-TTVDENVQTLSVTGTFDNCQDIVKAIFGDKEFN--HNVGAVNSINWARILAQ-TYYFYSFFQATNDSK-KVKFVVPSGNFGDILAGYFAKK-GLPIEKLAIATNENDILDRFLKSGLYERDKVAATLSPA-DILISSNFERLWYLAREAFQELKDFTSERVSNEETSETIKIYESSHYILDPHTAVGVCATERLNDKSIQYISLSTAHPAKFADAVNNALSGKDVLPEELKKLSTLKKKLKFIERDVELVKNAIEEEL
7	SP3	3v7na	0.286	0.995	8.808	threading_7	-NYISTRGAGERHTFSDILLGGLAKDGGLYLPSEYPQVSADELARWRTLPYADLAFEILSKFCDD-IAAADLRAITRRTYTADTPLTTLGTEVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKETLNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMYSLDPNIFNLAVNGVFDDCQDIVKAVSNDHAFKAQQKIGTVNSINWARVVAQVVYYFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGAYRVASNFERFVFDLLGRDPARVVQLFRDVEQDFARVAEFGSGRSTHADRIATIRDVFEYRTMIDTHTADGLKVAREHLRPGVPMVVLETAQPIKFGESIREALGQEPSRPAAFDGLEALPQRFEVVDANAQQVKDFIAAHT
8	SAM-T99	1vb3A	1.000	1.000	7.060	threading_8	MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ
9	MUSTER	3v7nA	0.282	0.995	2.655	threading_9	-NYISTRGIGERHTFSDILLGGLAKDGGLYLPSEYPQVSADELARWRTLPYADLAFEILSKFC-DDIAAADLRAITRRTYTAITPLTTLGTEVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKETLNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMYSLDPNIFNLAVNGVFDDCQDIVKAVSNDHAFKAQQKIGTVNSINWARVVAQVVYYFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGAYRVASNFERFVFDLLGRDPARVVQLFRDVEQKFARVAEFGFVSGHADRIATIRDVFERYRTMIDTHTADGLKVAREHLRPGVPMVVLETAQPIKFGESIREALGQEPSRPAAFDGLEALPQRFEVVDANAQQVKDFIAAHT
10	SPARKS	1vb3a	1.000	1.000	8.061	threading_10	MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=1.000 to 1vb3A TM-score=1.000 to native SCOP code=c.79.1.1	TM-score=1.000 to 1vb3A TM-score=1.000 to native SCOP code=c.79.1.1	TM-score=0.871 to 1kl7A TM-score=0.863 to native SCOP code=c.79.1.1	TM-score=0.869 to 1vb3A TM-score=0.869 to native SCOP code=c.79.1.1	TM-score=1.000 to 1vb3A TM-score=1.000 to native SCOP code=c.79.1.1

Experimental Structure

Download 1vb3A

SCOP code=c.79.1.1