Template-based Modeling Results for THIP_ECOLI

Submitted Primary Sequence

>Length 536
MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWVAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWVAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWVAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
55333222221110100000000000000000010220112000100211200200100001000000000000000000011231202200210000010001000000000010320100100210203111001000000001001000000110130034012302200321302102001000001012100000000001000101000000001312111000010012211211000000000000000000022013222312222312232332211200000010001111101010100200122002000222002000100100000000000000000000100212132100200200000010000000000000001222010100000000000010001002101200230122012004203130010000010210120001000000010002000000001331210000001101213021000000000000000000022122332434
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWVAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
1	MUSTER	2onkC	0.202	0.463	1.700	threading_1	LL---------FSALLALLSSIILLFVLLPVAATVTLQNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSF---SPLKF---VDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYP--MIAPTLIYERYLS-EGLSAAMPVAAILILLSLAVFVALRIIVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1qgra	0.119	1.000	2.366	threading_2	MTLGTETYRPSSASQCVAGIACMKESTLEAIGYICQDIDPEQLQANFDKESERHFIMQVVCEAVRVAALQNLVKILFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASETSKFYAKGALQYLDDDDDWNPCKAAGVCLMLLATCCEDIVPHVLPFIKEHDWRYRDAAVMPEPSQLKPLVIQAMPTLIELMSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSDGHQNNLRSSAYESLMEIVKNSADCYPAVQKTTLVIMERLQQVLQMRIQFNDLQSLLCATLQNVLHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENPQILSVFGDGEFKKYLEVVLNTLQQASLNELRESCLEAYTGIVQGLKGDQENVHFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFVLKLVEARPMNQA
3	HHPRED-g	3d31_C	0.165	0.440	4.160	threading_3	------------P---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTFVFSFLLLVLFLFIFLTLSNMIFEQIFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDF----PGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYY-PMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR----------
4	MUSTER	1b3uA	0.096	0.953	1.180	threading_4	AAADGDD-------SLYPIAVLIDELVQLRLNSIKK---LSTIALALGVERTRSELLPFLTDTIDEVLLALAEQLGFTTLVGGPEYCLLPPLESLATVEETVVRDKAVESLRAISHEHSFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLPMVRRAAASKLGVLELDNVKSEIIPMFSNLA-DSVRLLAVEACVNIAQLL---PQEDLEALVMPTLRQAAEDKSVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKD-------CEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAVRLAIIEYMPLLAGQLFFDEKLNSLCMAWLVDVYAIREAATSNLKKFGKEWAHATIIPKVLAMSGYLHRMTTLFCINVLSEVC---GQDITHMLPTVLRMAGVANVRFNVAKSLQKIGPILDNSTLQSEVK-EKLTQD
5	SPARKS	2onkc	0.210	0.470	6.671	threading_5	-----MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSF---SPLKFVDA---LPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPM--IAPTLIYERYLS-EGLSAAMPVAAILILLSLAVFVALRIIVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PROSPECT2	2onkC	0.224	0.466	2.419	threading_6	MRLL-------FSALLALLSSIILLFVLLPVAATVTLQNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSF---SPLKFVDA---LPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG------
7	PROSPECT2	1b3ua	0.091	0.942	2.315	threading_7	AA--ADGDDSLYPIAVLIDEVQLRLNSIKKLSTIALALGVERTRSELDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLRAAASKLGEFAKVLELDNVKS------EIIPMFSNLASDSVRLLAVEACVNIAQL-------------LPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDL---VPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSNQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIIDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAKLNSLCMAWLVAIREAATSNLKKLVEKFGK---EWAHATIIPKVLAYLHRMTTLFCINVLSEVCGQDIT----TKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPIVKPILEKLTQDQDVLA
8	PPA-I	2onkC	0.200	0.466	4.221	threading_8	-------MRLLFSALLALLSSIILLFVLLPVAATVTLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSF---SPLKFVDA---LPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPM--IAPTLIYERYLS-EGLSAAMPVAAILILLSLAVFVALRIIVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	HHPRED-l	3rlf_F	0.167	0.750	4.539	threading_9	----------------------------------------------------WQALKW----SV--LGLLGLLVGYLVVLMYAQ---GEYLFAITT-------LILSSAGLYIFANRKA-------------YAWRYVYPGMAGMGLFVLFPLVCTIAI-AFTNYSSTFERAQEVLLDRSWQTYNFGLYP-------AG---------DEWQLALSDGETPEGERLRVITRQALSDTAILPDGNKV---------MMS-SLRQFSGTQPLTLDGDGTLTNNQIGFYQSI-------NWGDEKLSPGYTVTT--GWKNFTRVFTDEGFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWE----ALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTGPYTDLLVNYTYRIAFEQDFGLAAAIATLIFLLVGALAI-------------
10	HHPRED-l	2onk_C	0.200	0.466	5.010	threading_10	-------MRLLFSALLALLSSIILLFVLLPVAATVTLQNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFS---PLK---FVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYP--MIAPTLIYER-YLSEGLSAAMPVAAILILLSLAVFVALRIIVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.706 to 2onkC SCOP code=f.58.1.1	TM-score=0.662 to 1qgkA SCOP code=a.118.1.1	TM-score=0.717 to 2onkC SCOP code=f.58.1.1	TM-score=0.455 to 3dhwA SCOP code=f.58.1.1	TM-score=0.872 to 1b3uA SCOP code=a.118.1.2