Template-based Modeling Results for THIM_ECOLI

Submitted Primary Sequence

>Length 262
MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA
5533221212002002102431100000002001100000010011221112213101200210100000001013210100210021022121100000100001310220021112221100211011000001212113113123112101200220033020100010311000122100001011221130000000000000000012222120000000002100220133131101000200000120233235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA
1	MUSTER	1c3qA	0.374	1.000	2.623	threading_1	MRGGSMDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIRERLAAIRGNAAEIAHTVGVTWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTKGPGSFQIELLNKLSTVTEQDVQ
2	SPARKS	1v8aa	0.367	0.935	4.831	threading_2	-------MKFIIEALKRVRERRPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEEG---------GEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVAVT-EPLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIR
3	PROSPECT2	3nl2A2	0.293	0.950	3.288	threading_3	TKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHALLLNTGSVAPPE--MLKAAIRAYNDVKRPIVFDPVGSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELSN-----------ELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLIPCVAVEAGPIGCSLGSTIACMIGGQPSEFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTT
4	PPA-I	1c3qA	0.370	1.000	2.602	threading_4	HHHGSMDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIRERLAAIRGNAAEIAHTVGVTWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTAGPGSFQIELLNKLSTVTEQDVQ
5	HHPRED-l	1ekq_A	0.386	0.920	5.430	threading_5	-----MDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIRVRLAAIRGNAAEIAHTVG--------------GDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAG-LLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTKGPGSFQIELLNKLSTVTEQDV-
6	HHPRED-g	1ekq_A	0.384	0.924	5.915	threading_6	-----MDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIRVRLAAIRGNAAEIAHTVG--------------GDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAG-LLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTKGPGSFQIELLNKLSTVTEQDVQ
7	SP3	1ekqa	0.384	0.924	5.213	threading_7	-----MDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIRVRLAAIRGNAAEIAHTVG--------------GDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGL-LTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTKGPGSFQIELLNKLSTVTEQDVQ
8	SAM-T99	3hpdA	0.367	0.935	5.570	threading_8	-------MKFIIEALKRVRERRPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEEG---------GEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVAVT-EPLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIR
9	MUSTER	3hpdA	0.367	0.935	2.598	threading_9	-------MKFIIEALKRVRERRPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEEG---------GEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVAVT-EPLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIR
10	SPARKS	1ekqa	0.384	0.924	4.741	threading_10	-----MDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIRVRLAAIRGNAAEIAHTVG--------------GDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGL-LTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQDKGPGSFQIELLNKLSTVTEQDVQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.957 to 1c3qA SCOP code=c.72.1.2	TM-score=0.912 to 1c3qA SCOP code=c.72.1.2	TM-score=0.821 to 1c3qA SCOP code=c.72.1.2	TM-score=0.960 to 1c3qA SCOP code=c.72.1.2	TM-score=0.923 to 1c3qA SCOP code=c.72.1.2