Template-based Modeling Results for THIF_ECOLI

Submitted Primary Sequence

>Length 251
MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGGSNADPV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGGSNADPV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCCCCEEHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGGSNADPV
44331022111301133012311220231100000110000000100000010100001112022120221000223204211020012101501230101002230113002100230000000011010110001001214100000000002010000112342100000123333332214210000000000000001200100021321101000010220201101034122021012232235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGGSNADPV
1	MUSTER	1zkmA	1.000	0.972	4.294	threading_1	MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCG-------
2	SPARKS	1jw9b	0.460	0.944	5.135	threading_2	LSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSRL-------FGEAGVMAPLIGVIGSLQAMEAIKMLAGYGKPAGKIVMYDAMTCQFREMKLMRNPGCEVCG-------
3	PROSPECT2	1zfnA	1.000	0.972	5.490	threading_3	MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCG-------
4	PPA-I	1zkmA	1.000	0.972	6.603	threading_4	MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCG-------
5	HHPRED-l	1zud_1	1.000	0.932	4.391	threading_5	MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWP-----------AGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGG------
6	HHPRED-g	1jw9_B	0.464	0.944	4.266	threading_6	LSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSRLFGE-------AGVMAPLIGVIGSLQAMEAIKMLAGYGKPAGKIVMYDAMTCQFREMKLMRNPGCEVCG-------
7	SP3	3ruia	0.224	0.976	5.567	threading_7	DQSVDLNLKLKWRILPDLN---LDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLDATGEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVIN-AALGFDSYLVRHGNRDQLGCYFCHDVVAPTDSRTLDQSTVTR--PGVAASSLAVELTSLLQTKYSVLGDIHQIRGFLHNFSILKLPAYEHCPACSPKVIEAF
8	SAM-T99	1zkmA	1.000	0.972	6.218	threading_8	MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCG-------
9	MUSTER	1jwbB	0.451	0.944	4.049	threading_9	LSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSR-------LFGEAGVMAPLIGVIGSLQAMEAIKMLAGYGKASGKIVMYDAMTCQFREMKLMRNPGCEVCG-------
10	SPARKS	3vh1a	0.212	0.976	4.832	threading_10	QSVDLNLKLMKWRILPDLN---LDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAAL-GFDSYLVMRHGQ--LGCYFCHDVVAPTDSLTDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSSETTVQIRGFLHNFSILKLPAYEHCPACSPKVIEAF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.931 to 1jwbB TM-score=0.994 to native SCOP code=c.111.1.1	TM-score=0.931 to 1jwbB TM-score=0.994 to native SCOP code=c.111.1.1	TM-score=0.953 to 1jwbB TM-score=0.934 to native SCOP code=c.111.1.1	TM-score=0.931 to 1jwbB TM-score=0.999 to native SCOP code=c.111.1.1	TM-score=0.931 to 1jwbB TM-score=0.994 to native SCOP code=c.111.1.1

Experimental Structure

Download 1zfnA

SCOP code=c.111.1.1