Template-based Modeling Results for TFAD_ECOLI

Submitted Primary Sequence

>Length 247
MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEECCCCCCCCCEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
5522321122022002100320232331301200320110143211231412101101000200113202100002114111110000000000104332222321100000223212310222212201113212100011102123201122231311112120012223122212122122112101210131010021003132223310110210120010023011220121311222248
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
1	PROSPECT2	1e8ga1	0.105	0.964	1.164	threading_1	GGPKDGDLKQAVDIIRPLRLGMALQNVPILLDAAVL---GDKRSYSSRTEPLSDEELDKIAKQLNLGRWNFYGALYGPEPIRRVLWETIKDAF------SAIPGVKFYFPEDTPENSVLRVRDKTMQGIDWLPNGAHLFFSPIAKVSDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDDCAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAGVWPSQYSKL
2	HHPRED-l	2kz6_A	0.214	0.397	3.073	threading_2	-------------------------------------------------------------------------------------------------------------------MLLHSVETPRGEILNVSE---QEARDVFGAS-----EQ---------------AIADARKATILQTLRIERDERLRACDWT--------QVQ-DVVLTADQKATWAKYRQALDLPETVTDLQIVWPQLPV--
3	HHPRED-g	2kz6_A	0.214	0.397	3.735	threading_3	-------------------------------------------------------------------------------------------------------------------MLLHSVETPRGEILNVSEQEA---RDVFGA--------------------SEQAIADARKATILQTLRIERDERLRACDWT--------QVQ-DVVLTADQKATWAKYRQALDLPETVTDLQIVWPQLPV--
4	PROSPECT2	1pyma	0.072	0.899	1.155	threading_4	VKHNGLSARIVQELSVSAQLGVRDSNEASWTQVVEVLEFSDASDVPADTGYGNFNNARRLVRKLEDRGVAGACLEAQPLADIEEFALKIKACKDSQTDPDF------CIVARVEAFIAGWGLDEGADAILHSKKADPSDIEAFKAWNNQGPVVIVPTKYYKTPDGVSVIWANHNLRASVSAIQQTTKQIYDDQS------LVNVEDKIVSVKEIFRLQRDDELVQAEDKYLPKN-------------
5	HHPRED-l	2o0j_A	0.135	0.781	1.527	threading_5	ANWTREMVEEWKKCR------------DDIVYFAETYCAITHIDY-GVIKVQLRDYQRDMLKIMSSK--RMTVCNLSRQLGKTTVVAIFLAHFVCFNKD------KAVGILAHKGSAIELLPWNKGSIEL--DNGSSIGAY--ASSPDGNSF------------AMIYIEDCAFIPN----FH----DSWL----AIQPVISSKIIITTTPNGLNHF--YDIWTAAVEGK--SGFYTAIWNSVKER-
6	HHPRED-g	2o0j_A	0.096	0.842	1.416	threading_6	WT--REMVEEWKKCRDD------------IVYFAETYCAITHIDY-GVIKVQLRDYQRDMLKIMSSKR--MTVCNLSRQLGKTTVVAIFLAHFVCFNKDKA-----VGILAHKGSMSAEVL-DRTKQAIELLPDLQPGIVEW------NKGSIELDNGSSIGAGNSIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIII--------TTTPNGL-N-HFYDIWTAAVEGKSGFEPYTAIWNSVKERG
7	PROSPECT2	1k0ia1	0.108	0.903	1.129	threading_7	MRQTPDYVLGLEQGMVDLLREAGVD-----RRMARDGLVHEGVEIAFAGQRRRIDLKRLS----GGKTVTV--------YGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCD------YIAGCDGFHGISRQSIPAERMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTVGLPYEEI-E
8	HHPRED-l	3cpe_A	0.128	0.887	1.387	threading_8	ANIKTQWT----REMVEEWKKCR----DDIVYFAETYCAITHIDY-GVIKVQLRDYQRDMLKIMS--SKRMTVCNLSRQLGKTTVVAIFLAHFVCFNKDK------AVGILAHKGSMIELLPDNKGSSIGAYNSFAMIYIEDCAFIPNFSLAIQPVISS-GRRSKIIITTTPNGL--------NHFYDIWTAAVEGKSIWNSV-KERLYNDEDGWQWSIQTQFRQEHTAEGTSGTSVMDFIEKPEP-
9	PROSPECT2	1vjzA	0.089	0.911	1.102	threading_9	IAFSIKSTGNFKEEDFLHLLWSDRGNPFIVIFWGEKYYSVNKEVEEKTNLWKDETHWSFIARRYKGISSTHLSFNFPDPQISVEDHNSLIKRTITEIRK--IDPERLIIIDGLGYGNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWN--------------------REKLLEHYLTWIKLRQKGINKTPHDVVLKWLEDLLEIFKTLNIGPFGILDSERKDVEY
10	PROSPECT2	1diqa1	0.097	0.915	1.101	threading_10	PVEDEADIVEIVDALRPLRMSNTIPNSVVITLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQEQVDVNWKIVTDVFKKLGKG------RIVTQEEAGDTQPFKYRAQLMS---------------GVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMAKRVLHEETKRADACFNELLDEFEKEGYVNTRFQDRVAQSYGPVKRKLENNILAPGRSGIDLNNDF

Predicted Tertiary Structure


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TM-score=0.623 to 1diqA SCOP code=d.58.32.1	TM-score=0.408 to 1lghB SCOP code=f.3.1.1	TM-score=0.419 to 1q90R SCOP code=f.23.12.1	TM-score=0.719 to 1pymA SCOP code=c.1.12.7	TM-score=0.582 to 3pjrA SCOP code=c.37.1.19