Template-based Modeling Results for TDH_ECOLI

Submitted Primary Sequence

>Length 341
MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD
CCEEEEECCCCCEEEEECCCCCCCCCEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHCCCHHHCCCCCEEEECCCCCCEEEEEEEHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHEEEEEEHHHHHHHHHHHHCCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD
32010202234202012032131343101010200000000001021231122203000001110001001004414203201100010201012021032122100310100001311000100000020002013302210000000000001002113121120000000000000000042120210000002321020034010110010233203200121133300100010010130021002002410100000013230201022002210101001023111012100000331030230000101031023002103323201000214
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD
1	MUSTER	2ejvA	0.428	0.994	3.541	threading_1	MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELMRGITAFGIAGRRLWQTWMQGTALVYSGVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK
2	SPARKS	3m6ia	0.272	0.991	4.209	threading_2	TNIGVFTNPQHDLWISEASPEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPPGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLSVALAGLQRAGVLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVEEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQY--RYCNTWPRAIRLVENGVDLTRLVTHRFPLEDALKAFETASDPKTGKVQIQSL
3	PROSPECT2	3m6iA	0.266	0.991	5.343	threading_3	TNIGVFTNPQHDLWISEASPEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPPGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLSVALAGLQRAGVLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQY--RYCNTWPRAIRLVENGVDLTRLVTHRFPLEDALKAFETASDPGAIKVQIQSL
4	PPA-I	2ejvA	0.428	0.994	3.945	threading_4	MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELMRGITAFGIAGRRLWQTWMQGTALVYSGVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK
5	HHPRED-l	2d8a_A	0.436	0.941	2.350	threading_5	-VAI-KTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQI-GHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCY------------TKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEV-DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNLIIFKALTIYGITGRHLWETWYTVSRLLQGKLNLDPIITHKYKFDKYEEAFEL-RAGKTGKVVF---
6	HHPRED-g	2d8a_A	0.442	0.941	2.043	threading_6	-VAI-KTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQI-GHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCY------------TKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEV-DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGLNLDPIITHKYKFDKYEEAFEL-RAGKTGKVVF---
7	SP3	3m6ia	0.266	0.991	4.433	threading_7	TNIGVFTNPQHDLWISEASPEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVEEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQY--RYCNTWPRAIRLVENGVDLTRLVTHRFPLEDALKAFETASDPKTIKVQIQSL
8	SAM-T99	1pl7A	0.275	0.991	3.219	threading_8	NLSLVVHGPG-DLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCAPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVF-RYC-NTWPVAISMLASKVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD
9	MUSTER	2dfvA	0.440	0.985	3.368	threading_9	EKVAIKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIK-PPQIGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEV-DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIFKALTIYGITGRHLWETWYTVSRLLQSGLNLDPIITHKYKFDKYEEAFEL-RAGKTGKVVF--K
10	SPARKS	1e3ja	0.278	0.991	3.573	threading_10	DNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLDPAKEEESSIIERIRIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFR--YCNDYPIALEMVASGCNVKQLVTHSFKLEQTVDAFEAARKKADIKVMISCR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.922 to 1e3jA SCOP code=b.35.1.2	TM-score=0.922 to 1e3jA SCOP code=b.35.1.2	TM-score=0.924 to 1pl7A SCOP code=b.35.1.2	TM-score=0.924 to 1pl7A SCOP code=b.35.1.2	TM-score=0.922 to 1e3jA SCOP code=b.35.1.2