Template-based Modeling Results for TDCC_ECOLI

Submitted Primary Sequence

>Length 443
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
55333222223233221111111100000000010001101130112010000000010111000002000000000333333003001210232001000000000001101100010011012001220112212200000000000000111232100200111010000000000101022010100220321222221130000000000000000010010000001111331443213310231021000100000000000000000010112201202422030000002212222123111100020000000000001110011000120010001200231332422212010000000000000001111201100210001000000000000002102002303130100000000000001101412
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
1	MUSTER	3gi9C	0.150	0.871	1.178	threading_1	MELKNKKLSL------WE-----AVSMAVGVMIGASIFSIFVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVSNAGPI-AFIHKAIGDN------IITGALSILLWMSYVISIAKGFAGYFLPLIPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYV--------IPDLAPSAVSGMIFASAIFFLSYMGFGVITNAS-------EHIEN---PKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE------NALAV------AAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDFFERKVWFKFNMEGVASITSAVFMVIYLFVIL---SHYILIDEVGGVIFSFIVVLGVFLLLLYYQWITN-----RFVFYGIIATFIGVLIFEIIY
2	SPARKS	3ob6a	0.137	0.871	1.774	threading_2	--------ADAHKVGLIP-----VTLMVSGNIMGSGVFLLPANASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSY-AYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPIL--KDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA-----AWNVSGLGTFGAIQSTLNVTLWSFI----------------GVEVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAMIPNAALRVSA----SPFGDAARMALGDTAGAISFCAAAGCLGSLGGWTLLAGQTA--KAAADD---GLFPPIFARVNKAGTP---VAGLIIVGILMTIFQLSSISPGLVSSVSVIFTPYLYTCAALLLLG--HGHFGKAR----PAYLAVTTIAFLYCIWAVVGSG
3	PROSPECT2	1b3ua	0.096	0.919	1.938	threading_3	AAADGD--------------DSLYPIAVLIDE-----------LRNEDVQLRLNSIIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRSHEHSPSDLEAHFVPLVKRLAGGDW-----------FTSRTSACGLFSVCYPRVSLGEFAKVLELDNVKSEIIPMFSNLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVHLLPLFLAQLKDEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVAATSNLKKLVEWAHATIIPKVLAMSGDHRMTTLFCINVLSVKPILEKLT
4	PPA-I	3gi9C	0.125	0.887	1.638	threading_4	MELKNKKLSLWE-----------AVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPI-AFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLI---APINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYV--------IPDLAPSAVSGMIFASAIFFLSYMGFGVITNAS----------EHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE------NALAV------AAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVG-----GRKEIVIFSFIVVLGVFLLLLYYQW
5	HHPRED-l	3gia_A	0.130	0.867	4.573	threading_5	-----------LKN----KKLSLWVSMAVGVMIGASIFSIFVIAGRNLPETFILSGI----YALLVAYSYTKLG--AKIVSAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLI-NAPI-NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDL--------APSAVSGMIFASAIFFLSYMGFGVITNASEHIEN----------PKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFL---------GNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSA----VFMVIYLFVILSHYILID-EVGGRKEIVIFSFIVVLGVFLLLLYYQ-
6	HHPRED-g	3gia_A	0.126	0.878	4.834	threading_6	-----------LK----NKKLSLWEAVAVGVMIGASIFSIFVGAKIAGRN-LPETFILSGIYALLVAYSYTKLGAKIVS-NAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLI-NAPI-NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDL--------APSAVSGMIFASAIFFLSYMGFGVITNASEHI----------ENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGN---------LGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVF----MVIYLFVILSHYILID-EVGGRKEIVIFSFIVVLGVFLLLLYYQW
7	SP3	3ob6a	0.132	0.874	1.799	threading_7	-----------ADAHKIP-----VTLMVSGNIMGSGVFLLPANASTGGI--AIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSY-AYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPIL--KDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLG-----TFGAIQSTLNVTLWSFESASVAAGVVKNPKR----------------NVPIATIGGVLIAAVCYVLSTTAMIPNAALRVSA----SPFGDAARMALGDTAGAISFCAAAGCLGSLGGWTLLAGQTA--KAAADD---GLFPPIFARVNKAGTP---VAGLIIVGILMTIFQLSSISPGLVSSVSVIFTPYLYTCAALLLLG--HGHFGKRPAYGSGAKEVMWSFVTLMVITAMYALN
8	SAM-T99	3hslX1	0.151	0.284	0.762	threading_8	EHIKSATKTGVVQVHGSACTPTLSVLSSVGTA---------------GVLGLRIKNALTPLVGHTEGSGDVSFSFRNTSVGSGFTHT-RELFGANVLDAGIAFYRPQFVRTTISYGDNLTSTVHKSVVDQKGIL------------------------------------------------------------P-----------------------------------------------------------------------------------------------------FHDRMEA--------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	3l1lA	0.132	0.853	1.134	threading_9	----------AHKVGLIP-----VTLMVSGAIMGSGVFLLP--ASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSY-AYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPI--LKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGW-FW---------FRGETYMA------AIQSTLNVTLWSFIGVESASVAA-------GVVKN---PKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRV---SA-SPFGDAARMALGD---------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDLFPPIF-ARVNKAGTPVAGLIIVGILMTIFQLSSPNATKEFGLV--SSVSVIFTLVPYLYTC-LLLLGHGHFGKARPAYLAVTTIAFLYCIWAVV
10	SPARKS	3gi8c	0.126	0.878	1.414	threading_10	MELKNKKLSLWE-----------AVSMAVGVMIGASIFSIFKIAGRN----LPETFILSGIYALLVAYSYTKLGAKIVSNAGPI-AFIHKAIGDN---IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIFAGLITIH----PSYVIPDLAPSAVSGMIFASAI----FFLSYMGFGVITNASEHIEN----------PKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGNLGFLLSIGALFSISSAMNATIYGGANVA--YSLAKDGEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVIL---SHYILIDEVGGIVVLGVFLLLLYYQWIT---------NRFVFYGIIATFIGVLIFEIIYR

Predicted Tertiary Structure


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TM-score=0.683 to 2q6hA SCOP code=f.54.1.1	TM-score=0.688 to 2q6hA SCOP code=f.54.1.1	TM-score=0.678 to 2q6hA SCOP code=f.54.1.1	TM-score=0.587 to 1b3uA SCOP code=a.118.1.2	TM-score=0.693 to 2q6hA SCOP code=f.54.1.1