Template-based Modeling Results for TATC_ECOLI

Submitted Primary Sequence

>Length 258
MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE
544432210120022004100100000000000000002100200010003211320100001002001000100000000000000000000000110244323100100000000000000000000011001001211230020001011001000000000000000000000002111121310231000000000000000012210010000000000000000001002232444343332323244345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE
1	PROSPECT2	3kb9A	0.083	0.984	1.426	threading_1	AVPRQLHPYWPKLQETEEYADGLCYTDLMAGLQAIADYSAWFFVWDDRHDRDIVHGRA----GAWRRLRGLLHTALDSPGDHTLVAGFADSVRRLYAFLPATWNARFARHFHTVIEAYDREFHNRHWIWTDLLEPSSGCELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPLGISLITHHSLTLEEAIGEVRAVERDALRFADELADGTVRGKELSGAVRANVMRNWFSSVYWFHHESGRYMVDSWDDRSTPPYVNN
2	PPA-I	1pw4A2	0.093	0.709	1.076	threading_2	--------------------------------------------------------------TAKQIFMQYVKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKAYFLYEYAGIPGTLLCGWMSDKVFRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-------------
3	HHPRED-l	2l0e_A	0.129	0.120	1.003	threading_3	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KK----KDNLLFGSIISAVDPVAVLAVFEEIHKK-------------K-------------------
4	PROSPECT2	3a0oA3	0.099	0.938	1.404	threading_4	AQTSHPRLWLEQLSAFADAVCQEVIYAIRHLAIAGRVLDDLLDASRKWLLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYD-----------WLYDHLSEDERRTVRSVLLERTREVADHVIHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATHYWMTGMAYLIEAANLIRSYIGYDLYQ-----RPFFQNTGRFPLYTKAPLPGLKLGYNVRQFAGVTGHYQWYFDHIKADATGTEMAPQVEAVSPADLP
5	PROSPECT2	1ee4a	0.112	1.000	1.387	threading_5	LSREHRPPIDVVIQMLQLEAAWALTNIQTKVVVDADAVPLFIQLLYTGLGNVAGDSTDVLQCNAMEPILPSLIRTATWTLSNLCWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELSTLVQTPALRAVGNIDLQTQVVINAGVLPALRLLCWTISNITAGNTEQIQKTKKEACWAISNASSGGLQRPDIIRYLVEVTLDALENILKMGEADKEARGLNINENADFIEKAGQNEN
6	PROSPECT2	1r2fA	0.095	0.938	1.360	threading_6	ISAINWNKIDDKDLEVWNRLTNDIPAWQQLTIRVFTGLTLLDTIQNIAGAPSLMADAI------------TPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALNEIRYTEALYAETGWVNDVK----AFLCYNANKALMNLGYEALFPPEMADVNPAILAALSP
7	PROSPECT2	2bkuB2	0.087	0.981	1.352	threading_7	MSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSP-----VSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFILNDIMALCVAAQNTKLDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVVGLIGDIAAMFPDGSIKQFYGQSGQLFSQA
8	MUSTER	1b3uA	0.100	0.930	0.871	threading_8	LSADCRSQILPCIKELVSQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVR---LNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDA-KWRVRLAIIEYMPLLAGQLGV---FFDEKLNSLCMAWL-VDHVYAI-----REAATSNLKKLVEKFGKEWAHATIIPKVLAM----SGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAANVRFNVAKSLQKIGPILDNSTLQSE-QDQDVD
9	SPARKS	2r8wa	0.122	0.733	0.822	threading_9	LTREERRRAIEAAATITDEAVALAKDAELLLAPVSYTQEEAYHHFAAVAGAT---ALPLAIYNNPTTTRFTFSDELLVRLA-YIPNIYAGELARLRPKLSDDGDWGCTDATLAGGDTWYSVVA----GLLPVPALQLRAAQAGNAEEAKRLDATFQPLWALFKEFG---SIRVIYAAANILSLLTSAERQRVEEALEALS----------------------------------------------------------
10	PROSPECT2	3l6aA	0.119	0.981	1.340	threading_10	HHSKEELEAVNGVREMRKHFLPEMLSKVIILSAFLNVLDQCKSYLAQFAARAIISEL-----VSISELAQPLESGTHFPLFLLCLQQLAELFQQSKVNMQKLPEIDQNKDRMLEILEGKGLSFLFPLLKLEKELLKQIKLDPSPQTIYKWIKDNISPKLHVDKGFVNILMTSFLQYISSEVNAPSKEQLEQEKQLLLSFKPVMQKFLHDHVDLQVSALYALQVHCYNLLRFFVHFYDMEIIEEEKEDITQEFPGKGTA

Predicted Tertiary Structure


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TM-score=0.438 to 1c17M SCOP code=f.18.1.1	TM-score=0.720 to 1hm7B SCOP code=a.128.1.4	TM-score=0.737 to 1pw4A SCOP code=f.38.1.1	TM-score=0.255 to 2ytrA SCOP code=k.12.1.1	TM-score=0.559 to 1j0nA SCOP code=a.102.3.2