Template-based Modeling Results for SXY_ECOLI

Submitted Primary Sequence

>Length 209
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
CCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCEEEEEEECCEEEEEECCCCHHHHHHCCCCCEEECCCCEECCCCCEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
55322331122012002300212020111000000110000000211000201430131024220220112321220212001013201311220030021001101322133323321320231122011001403032031023110310012024322201120001000002212221022211320121034022333222438
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
1	MUSTER	3bqsA	0.353	0.407	1.402	threading_1	------------------------------------------------------------------------------------------------------------------SLANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSLE----------
2	PROSPECT2	2od0A	0.320	0.478	1.502	threading_2	KP------ILKDSKLFEALGTIKSR-SFGGFGLFADE-TFALVVNNQLHIRADQQTSSDFETQGLKPYVYKKRGFPVVTKYYAISSELWESSDRLIEVAKKSLENAK-----------------------------------------------------------------------------------------------------L
3	SPARKS	3maba	0.353	0.407	1.751	threading_3	-------------------------------------------------------------------------------------------------------------------LANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSLEG---------
4	HHPRED-l	2od0_A	0.330	0.478	5.957	threading_4	--KPILKDS----KLFEALGTIKSRS-FGGFGLFADET-FALVVNNQLHIRADQQTSSDFETQGLKPYVYKKRGFPVVTKYYAISSELWESSDRLIEVAKKSLENAKL-----------------------------------------------------------------------------------------------------
5	PPA-I	3bqsA	0.353	0.407	3.329	threading_5	------------------------------------------------------------------------------------------------------------------SLANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSLE----------
6	HHPRED-g	2od0_A	0.330	0.478	5.168	threading_6	--KPILKDS----KLFEALGTIKSRS-FGGFGLFADET-FALVVNNQLHIRADQQTSSDFETQGLKPYVYKKRGFPVVTKYYAISSELWESSDRLIEVAKKSLENAKL-----------------------------------------------------------------------------------------------------
7	SAM-T99	3bqsA	0.375	0.383	3.667	threading_7	----------------------------------------------------------------------------------------------------------------------LSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSL-----------
8	MUSTER	2od0A	0.340	0.478	1.342	threading_8	------KPILKDSKLFEALGTIKSRS-FGGFGLFADE-TFALVVNNQLHIRADQQTSSDFETQGLKPYVYKKRGFPVVTKYYAISSELWESSDRLIEVAKKSLENAKL-----------------------------------------------------------------------------------------------------
9	SPARKS	3bqsa	0.353	0.407	1.641	threading_9	------------------------------------------------------------------------------------------------------------------SLANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSLE----------
10	PPA-I	2od0A	0.340	0.478	3.234	threading_10	------KPILKDSKLFEALGTIKSRS-FGGFGLFADE-TFALVVNNQLHIRADQQTSSDFETQGLKPYVYKKRGFPVVTKYYAISSELWESSDRLIEVAKKSLENAKL-----------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.455 to 1xu4A SCOP code=a.60.4.1	TM-score=0.728 to 2od0A SCOP code=d.198.5.2	TM-score=0.710 to 2od0A SCOP code=d.198.5.2	TM-score=0.456 to 1xu4A SCOP code=a.60.4.1	TM-score=0.730 to 2od0A SCOP code=d.198.5.2