Template-based Modeling Results for SUPH_ECOLI

Submitted Primary Sequence

>Length 271
MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS
CCCEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCEEECCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEECCCCCHHHHHHCCEECCCCCHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS
4511000000110002322201232012002202533010000011112201200330422100001100001132210021211332012001200333401000001220001231231011001321331220210330332000000012331022003201321322020000020001001320111200120033140222000000101000100200300001110131012103100421122000200200023222244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS
1	MUSTER	3l7yA	0.352	0.974	3.125	threading_1	-SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPERFFKLTLQVKEEESAQIMKAIADKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS------
2	SPARKS	3l7ya	0.356	0.974	4.375	threading_2	-SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPERFFKLTLQVKEEESAQIMKAIADKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS------
3	PROSPECT2	3l7yA	0.356	0.974	4.422	threading_3	-SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPERFFKLTLQVKEEESAQIMKAIADKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA------S
4	PPA-I	3l7yA	0.352	0.974	4.276	threading_4	-SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPERFFKLTLQVKEEESAQIMKAIADKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS------
5	HHPRED-l	1rlm_A	0.993	0.993	3.004	threading_5	-AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPFN-
6	HHPRED-g	1rlm_A	0.993	0.993	2.482	threading_6	-AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPFN-
7	SP3	3l7ya	0.352	0.974	4.438	threading_7	-SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPQAVIALSEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPERFFKLTLQVKEEESAQIMKAIAYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS------
8	SAM-T99	3l7yA	0.363	0.967	3.685	threading_8	-SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPERFFKLTLQVKEEESAQIMKAIADYKSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYL--------
9	MUSTER	2hf2B	0.951	0.970	3.124	threading_9	LSVKVIVTD-DGTFLNDAKTYNQPR-FAQYQELKKRGIKFVVASNNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALA-KHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDG-IKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAELKARY---SFAGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFN-
10	SPARKS	3r4ca	0.219	0.945	4.078	threading_10	HMIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDL-HEIDAVPYD-GVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFV-NRLTPTVEQIAGIVEHPVPPVVDIEEMRKECCQLCFYFDEEAEQKVMPLLS-----GLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHFVI-------

Predicted Tertiary Structure


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TM-score=0.874 to 1rkqA TM-score=0.942 to native SCOP code=c.108.1.10	TM-score=0.873 to 1rkqA TM-score=0.942 to native SCOP code=c.108.1.10	TM-score=0.873 to 1rkqA TM-score=0.937 to native SCOP code=c.108.1.10	TM-score=0.871 to 1rkqA TM-score=0.941 to native SCOP code=c.108.1.10	TM-score=0.874 to 1rkqA TM-score=0.942 to native SCOP code=c.108.1.10

Experimental Structure

Download 1rlmA

SCOP code=c.108.1.10