Template-based Modeling Results for SSUC_ECOLI

Submitted Primary Sequence

>Length 263
MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV
55221331111001000000000001000201101221000021002000210110300220000012001010000010101010000030023002100200220020000000000000320010000000000000000020034013100200311202001001000010000000100100000000000001001022000100010131020210000000000001001100200121002112123243234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV
1	MUSTER	3d31C	0.145	0.863	1.250	threading_1	------PLTFVFSFLLLVLFLFIFLTLSNM-------IFEQITEDFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFGKRLVESIIDV---VPHTVAGIALLTVFGIGLPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR--------------------
2	SPARKS	2onkc	0.144	0.897	2.956	threading_2	-MRLLFSALLALLSSIILLFVLLPVAATVTLQLFN----------FDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSPGKSVVEGIVDLPVVIPHTVAGIALLVVFGDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG----------------
3	PROSPECT2	2onkC	0.153	0.897	1.505	threading_3	MRLLFSALLALLSSIILLFVLLPVAATVTLQLFN-----------FDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFGKSVVEGIVDLPVVIPHTVAGIALLVVFGDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRII----------------VG
4	PPA-I	3d31C	0.139	0.875	3.331	threading_4	------PLTFVFSFLLLVLFLFIFLTLSNM-------IFEQITEDFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDPGKRLVESIIDVPVVVPHTVAGIALLTVFGDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR--------------------
5	HHPRED-l	3d31_C	0.136	0.867	5.288	threading_5	--------TFVFSFLLLVLFLFIFLTLSNMI-------FEQITEDFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDPGKRLVESIIDVPVVVPHTVAGIALLTVFGSALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR--------------------
6	HHPRED-g	3d31_C	0.135	0.871	5.009	threading_6	----------PLTFVFSFLLLVLFFIFLTLSNMI----FEQITEDFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDPGKRLVESIIDVPVVVPHTVAGIALLTVFGSALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR--------------------
7	SP3	2r6gg	0.169	0.966	2.192	threading_7	QKARLFITHLLLLLFIAAIMFPLLMVVAISLNFATGSLIPEQI-SWDHWKLALGFSPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRPGKATLLKGMLIFQMFPALSLVALYALFDRLGEYTHGGVIFAYLGIALHVWTIKGYETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQ---RWLVN-----GLTAGGV
8	SAM-T99	3d31C	0.169	0.810	1.465	threading_8	-------------PLTFVFSFLLLVLFLFIFLTLSNMIFEQITEDFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLL-------------------------IGSVMTWARAISEFGAVVILAYYPMVGPTLIYDRFISYGLSASR------------
9	MUSTER	2onkC	0.152	0.875	1.243	threading_9	MRLLFSALLALLSSIILLFVLLPVAATVTLQLF------------FDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFGKSVVEGIVDL---IPGIALLVVF--FSPLALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG----------------
10	SPARKS	3d31c	0.130	0.875	2.926	threading_10	---PLTFVFSFLLLVLFLFIFLTLSNMIFEQITEDF----------SGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDPGKRLVESIIDVPVVVPHTVAGIALLTVFGDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR--------------------

Predicted Tertiary Structure


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TM-score=0.823 to 3d31C SCOP code=f.58.1.1	TM-score=0.825 to 3d31C SCOP code=f.58.1.1	TM-score=0.849 to 2onkC SCOP code=f.58.1.1	TM-score=0.869 to 2onkC SCOP code=f.58.1.1	TM-score=0.833 to 3d31C SCOP code=f.58.1.1