Template-based Modeling Results for SSNA_ECOLI

Submitted Primary Sequence

>Length 442
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA
CEEEECCEEEEECCCCEEECCEEEEECCEEEEECCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECHHHHHHCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA
2000100100001323002100000221100000321344233110010302000000000000000000200122111022001002100020131023200110000000100310000001000011212100110020024010100001101222312432331132013002101202322232200000000101210231002101200431210000000211210110132112110000220300222000000010143102002323010000020113021000200221110000011000100110100011221121221110001001200200022122300203202300000000311110102100000000022110100002000012232010213100210230022013203325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA
1	MUSTER	3ls9A	0.199	0.957	2.945	threading_1	MILIRGLRVITFDDQRELEDADILIDGPKIVAVGKDLSDR-SVSRTIDGRGMIALPGLINSHQHLYEGAMRAILERVT----MASWLEGVLWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGADSYIDATIEAATDLGIRFHAARSSMTLGKSDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYEP-LDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGIREYLDAGITVGFGTTGSASNLLGDLRLAALAHRPAKWLSARELLRMATRGSAECLGR---PDLGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPLADLERIVANTTALIP----------
2	SPARKS	3ls9a	0.195	0.962	5.727	threading_2	MILIRGLRVITFDDQRELEDADILIDGPKIVAVGKDLS-DRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERV--TMASWLEGVLTRSAGWFGPDVIREVARAVLLESLLGGITTVADQHLFGATADSYIDATIEAATDLGIRFHAARSSMTLGKCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYEPL-DAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGIREYLDAGITVGFGTTGSASNLLGDLRLAALAHRPEKWLSARELLRMATRGSAECLGR---PDLGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPLADLERIVANTTALIP----------
3	PROSPECT2	3ls9A	0.205	0.962	5.159	threading_3	MILIRGLTRVITDQERELEDADILIDGPKIVAVGKDL-SDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERV--TMASWLEGVLWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFGATADSYIDATIEAATDLGIRFHAARSSMTLGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYEPL-DAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGIREYLDAGITVGFGTTGSASNLLGDLRLAALAHRPADPNSARELLRMATRGSAECLGR---PDLGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPLADLERIVANTTALI----------P
4	PPA-I	3ls9A	0.191	0.962	4.001	threading_4	MILIRGLRVITFDDQEELEDADILIDGPKIVAVGKDLS-DRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERV--TMASWLEGVLTRSAGWFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATAYIDATIEAATDLGIRFHAARSSMTLGKCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYEP-LDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGIREYLDAGITVGFGTTGSASNLLGDLRLAALAHRPEKWLSARELLRMATRGSAECLGR---PDLGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPLADLERIVANTTALIP----------
5	HHPRED-l	2paj_A	0.202	0.896	2.717	threading_5	STLIRNAAIMTGG-RGRVPGPDIRIVGDTIDAIGALAP--RPGETIVDATDCVIYPAWVNTHHHLFQSLLKGEP-------------------FRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPPFDSSAILFEEAEKLGLRFVLLRGGATQTRQLPLRPETLDAYV---ADIERLAARYHDPAMRRVVMAPTTVYSISPREMRETAAVARRLGLRMHSHLS-------------GKSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRL--PVREMADAGVPVSIGVDGAAADMISEVHMTWLAQRARL-ASIAEVIHWGTAGGARVMG--LD-EVGKVAVGYAADIAVYRLDDPRYFGLHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIGVDIKELGGEARRVVRELLREVVV--
6	HHPRED-g	2paj_A	0.204	0.889	3.166	threading_6	STLIRNAAIMTGG-RGRVPGPDIRIVGDTIDAIGALAP--RPGETIVDATDCVIYPAWVNTHHHLFQSLLKGEP-------------------FRALFDERRFRLAARIGLIELARSGCATVADHNVYYPGPFDSSAILFEEAEKLGLRFVLLRGGATQTLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVYSISPREMRETAAVARRLGLRMHSHLS-------------GKSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRL-----PMADAGVPVSIGVDGAASDMISEVHMTWLAQR----ASIAEVIHWGTAGGARVMGL--D-EVGKVAVGYAADIAVYRLDDPRYFGLHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIGVDIKELGGEARRVVRELLREVVV--
7	SP3	3ls9a	0.195	0.962	5.981	threading_7	MILIRGLRVITFDDQRELEDADILIDGPKIVAVGKDLS-DRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERV--TMASWLEGVLTRSAGWFGPDVIREVARAVLLESLLGGITTVADQHLFFATADSYIDATIEAATDLGIRFHAARSSMTLGKCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYEPL-DAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGIREYLDAGITVGFGTTGSASNLLGDLRLAALAHRPEKWLSARELLRMATRGSAECLGR---PDLGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPLADLERIVANTTALIP----------
8	SAM-T99	3hpaA	0.218	0.925	5.242	threading_8	TLLVKHAVLVTMDDRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVAQNAE----LFGWL-TNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHYIYP--NGSRLDDSIGAAQRIGMRFHASRGAMSEPD-----------ILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAY-------TPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIAPMRLAGVPVGLGVDGSASQMVAEVRQALLLQRVGFGPTAREALEIATLGGAKVLNR---DDIGALKPGMAADFAAFDLRQPLFAGLHDPVAALVFCA-PSQTAYTVVNGKVVVREGRLTLDLPPVIERHNALAHALVEAA----
9	MUSTER	3hpaA	0.214	0.930	2.834	threading_9	TLLVKHAVLVTMDDTRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVAQNAE----LFGWLTN-LYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPN-GSRLDDSIGAAQRIGMRFHASRGAMS-----------EPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYT-------PAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGVKKMRLAGVPVGLGVDGSASQMVAEVRQALLLQRGPDAMTAREALEIATLGGAKVLNR---DDIGALKPGMAADFAAFDLRQPLFAALHDPVAALVFCAPS-QTAYTVVNGKVVVREGRLTLDLPPVIERHNALAHALVEAAR---
10	SPARKS	3lnpa	0.231	0.932	4.881	threading_10	DLRINSHWIIPIENTNILIDHCLLIKDGIILAIEPQSSCQIPATETLDL-GQQVLPGWVNAHGH-AASLFRGLADDLP-----LTWLQEHVWPAEAQHVDEHFVKQGTELAIAEIQSGTTTFADYFY--------PQQSGEAALAAGIRAVCFAPVLDFPTN---YAQNADEYIRKAIECNDRFNNPNEQGLVQIGFGPHAPYTVSDEPLKEITLSDQLDP--VQIHLHETDFEVSESLETFNKRPTQRLADIGFLNERVSCVH-TQVDDGDIKILQKTGASIIHCPESNLKLASGIAKLSAANIPLAIGTDGAASNDFSETKTAALLAKDASAIPAIEAL-TATLGGARALG--IDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVS-HVYCTKSTQVSHVWVNGRCLLKNGELTLNEETLINHAKAWASAIRTP-----

Predicted Tertiary Structure


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TM-score=0.871 to 2pajA SCOP code=b.92.1.4	TM-score=0.863 to 2pajA SCOP code=b.92.1.4	TM-score=0.862 to 2pajA SCOP code=b.92.1.4	TM-score=0.870 to 2pajA SCOP code=b.92.1.4	TM-score=0.867 to 2pajA SCOP code=b.92.1.4