Template-based Modeling Results for THTM_ECOLI

Submitted Primary Sequence

>Length 281
MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK
CCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK
54332111031014113232000000211121333421021022100200000003102122221222113131002004302133321000012221100000000021011310000110010013121111121131131111022223111302101201333211000022122123323324212231102001101022013313131131011002222123332000000100000000000220313202001000110023231323334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK
1	MUSTER	3olhA	0.404	0.961	3.206	threading_1	--FQSMVSAQWVAEALRAPPLQLLDASWYLPK---RDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDAQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPSSGK-SQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRAR-P----E
2	SPARKS	1rhs_	0.356	0.989	5.476	threading_2	VLYRALVSTKWLAESVRGPGLRVLDASWYSPG--TREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAGLDSGHIRGSVNMPFMNFLEDGFEKSPEELRAMFEAKKVDLTKP-LIATRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHPPETWVSQGK
3	PROSPECT2	3olhA	0.402	0.964	5.422	threading_3	--FQSMVSAQWVAEALRAPPLQLLDASWYLP---KRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPSSGKSQ-PAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRAR----PED
4	PPA-I	3olhA	0.399	0.964	3.523	threading_4	--FQSMVSAQWVAEALRAPRLQLLDASWYLPK---RDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPSSGK-SQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPED----
5	HHPRED-l	1urh_A	1.000	0.929	3.990	threading_5	--TTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDE----LRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVS-GSGVTAAVVLLALATLDVPNVKLYDGAWSE-------------
6	HHPRED-g	1rhs_A	0.363	0.989	3.814	threading_6	VLYRALVSTKWLAESVRGPGLRVLDASWYSPG--TREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAGLDSGHIRGSVNMPFMNFLTDGFEKSPEELRAMFEAKKVDLTKPLIAT-RKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRPETWVSQGK
7	SP3	1rhs_	0.353	0.989	5.303	threading_7	VLYRALVSTKWLAESVRGPGLRVLDASWYSP--GTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAGLDSGHIRGSVNMPFMNFLEDGFEKSPEELRAMFEAKKVDLTKP-LIATRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHPPETWVSQGK
8	SAM-T99	1orbA	0.364	0.979	4.589	threading_8	VLYRALVSTKWLAESVRAPGLRVLDASWYS--PGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPAVGLDSGHIRGSVNMPFMNFLTDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHR--APPET--
9	MUSTER	1urhA	0.981	0.929	3.035	threading_9	--TTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDELRR----GHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKP-IIVSGSGVTAAVVLLALATLDVPNVKLYDGAWSE-------------
10	SPARKS	1urha	0.977	0.929	5.171	threading_10	--TTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDELRR----GHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDK-PIIVSGSGVTAAVVLLALATLDVPNVKLYDGAWSE-------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.934 to 1orbA TM-score=0.903 to native SCOP code=c.46.1.2	TM-score=0.933 to 1orbA TM-score=0.900 to native SCOP code=c.46.1.2	TM-score=0.960 to 1orbA TM-score=0.904 to native SCOP code=c.46.1.2	TM-score=0.925 to 1orbA TM-score=0.902 to native SCOP code=c.46.1.2	TM-score=0.933 to 1orbA TM-score=0.900 to native SCOP code=c.46.1.2

Experimental Structure

Download 1urhA

SCOP code=c.46.1.2