Template-based Modeling Results for SRLR_ECOLI

Submitted Primary Sequence

>Length 257
MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE
CCHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCEEEEECCEEECCCCCEECHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEEECHHHCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE
43232002100210352220203200420311121023002202521100101100001433222213222311132131002001200331100001000001100210252330100000020010003133321000010201332100103001200320100000000100112210111221110121003103000000121312220000001032001000122023201300352211001023347
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE
1	SPARKS	2w48a	0.142	0.903	1.288	threading_1	SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGIVTIA----INYDYNENLWLEQQLKQKEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARLKSLDVALVGGSPAIRDGAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSEKTEMAKLRQARYSIGIAGEEK--YSGILGALHGRYINCLVTN----RETAELLLK-------------
2	PROSPECT2	2w48A	0.113	0.965	1.693	threading_2	-SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLEEEQLSAMGQHGALLLEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAAR--------LKAESHLADFPALSQHFKTISSYWDLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICGLVDTNMSEKTLSIEMAKARYSIMGEEKYSGILGALHGRYINCLVTNRETK
3	PPA-I	1uj5A	0.191	0.611	1.378	threading_3	-----------------------------------------------------------------------RPLESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELAELKGVVGVPTSRATEELAKRE---------GIPLVDLPPE-------------GVDLAIDGADEIAPGLALKGMGGALLREKIVERVAKEFIVIADHTKKVP-------VLGRGPPVEIVPFGYRATLKAIADLGGEPELRMDGDE
4	SP3	2w48a	0.125	0.965	1.003	threading_4	SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGIVT-----IAINYDYNENLWLEQQLKQKEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISLDVALVGIGSPAIRDGAN---WHAFYGSEESDDLNARHVAGDIDINGGLVDTNMIEMAKLRYSIGGEEKYSGILGALHGRYINCLVTNRETA
5	HHPRED-l	3rrl_B	0.172	0.634	3.388	threading_5	-----------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVS-G-NIVFQSENGLLGYPLEGSVDADL-INAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLNW-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVFEF-----SNNA-KLVELQEGV-
6	SAM-T99	1i1gA1	0.280	0.195	1.254	threading_6	---DERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-g	3rrl_B	0.177	0.638	3.221	threading_7	-----------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVS-G-NIVFQSENGLLGYPLEGSVD-ADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-PKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVSLDQVKEKTEAEFEVRL------
8	PROSPECT2	1bia_	0.140	0.833	1.478	threading_8	MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVVFTVPGKGYSLPEPIQLLNAKQILGQ--------------LDGGSVAVLPVIDSTNQYLLIGELKSGDACIAEYIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGIL----VELTGAAQIVIGAMWITLQEAGINLDRNTLAAMLIRELRAA--------------------LELF-----EQEGLAPYLSRWEKINRPVKLIIGDKE
9	SP3	1ks2a1	0.226	0.533	1.183	threading_9	------------------------------------------------------------------------TQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTKGQIGAVSSSDASTEKLKSL---------GIHVFD-------------LNEVSLGIYVDGADEINGH-QIKGGGAALTREKIIASVAEKFICIADASKQ-------------VDIL-ANRGAD-----------VALIGTPDGVK
10	MUSTER	2w48B	0.159	0.883	0.754	threading_10	SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGILKQKFG-AVVASSDGLL--------EEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARDNPLDVALVGGSPAIRDGAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSLSIEMAKLRQARYSIGIAGEEKY--SGILGALHGRYINCLVTN----RETAELLLK-------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.608 to 2gnpA SCOP code=c.124.1.8	TM-score=0.645 to 2gnpA SCOP code=c.124.1.8	TM-score=0.625 to 1uj5A SCOP code=c.124.1.4	TM-score=0.654 to 2gnpA SCOP code=c.124.1.8	TM-score=0.650 to 2nrcB SCOP code=c.124.1.3