Template-based Modeling Results for SPEE_ECOLI

Submitted Primary Sequence

>Length 288
MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS
CCCCCCEEEECCCCCCEEEEECCEEEEEECCCCEEEEEEECCCCEEEEECCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCHHHCCCCCCCCCEEEEECHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHCCCHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS
555341002201341010010220012221321101001022211000011001013322110110000001011221320000000100002100313222000001012100100331023212211323102000110010023123200000010111212032111220020013004320000010211222232012012200310220000000010111010000000233224322231021102322230210021000000000310231132234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS
1	MUSTER	2o06A	0.339	0.993	2.846	threading_1	AAIREGWFRELWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA-IGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS-
2	SPARKS	3o4fa	0.996	0.979	5.477	threading_2	---KKQWHETLHDQFGQYFAVDNVLYHE---KQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS
3	PROSPECT2	1zdzA	0.343	0.983	4.497	threading_3	-AIREGWFRELWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAI-GYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALN---D
4	PPA-I	2o06A	0.336	0.993	2.939	threading_4	AAIREGWFRETWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA-IGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALNDVS-
5	HHPRED-l	1xj5_A	0.365	0.962	3.855	threading_5	STVIPGWFSE-WPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQE-ITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQID-CEIDK-VVDVSKQFFPDVAI-GYEDPRVNLVIGDGVAFLKNAAGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLH-DIIEDIVSNCREIFKGSVNYWTSVPTYPSGVIGF-LCSTEGPDVDFKHNPIDESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIE----
6	HHPRED-g	1xj5_A	0.365	0.962	3.722	threading_6	STVIPGWFSE-WPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQE-ITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQID-CEIDK-VVDVSKQFFPDVAIG-YEDPRVNLVIGDGVAFLKNAAGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLH-DIIEDIVSNCREIFKSVNYAWTSVPTYPSGVIGF-LCSTEGPDVDFKHPLNPISSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIE----
7	SP3	3o4fa	0.996	0.979	5.824	threading_7	---KKQWHETLHDQFGQYFAVDNVLYHE---KQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS
8	SAM-T99	2o06A	0.345	0.986	3.745	threading_8	AIREGWFRETLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALND---
9	MUSTER	1iy9A	0.370	0.948	2.832	threading_9	---SELWTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIA-GKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKYDPLAVEDSRF------FDIETKYYTKDIHKAAFVLPKFVSDLI-----
10	SPARKS	1uira	0.372	0.990	4.619	threading_10	MDYGMYFFEHVTPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLR--VHPVVHRTVREAFRYVRSYKNHIPGFFLN-FGFLLASDAFDPAAFSEGVIEARIRERNLALRHLTAPYLEAMFVLPKDLLEALEKETM

Predicted Tertiary Structure


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TM-score=0.971 to 2o06A TM-score=0.872 to native SCOP code=c.66.1.17	TM-score=0.976 to 2o06A TM-score=0.875 to native SCOP code=c.66.1.17	TM-score=0.883 to 1iy9A TM-score=0.994 to native SCOP code=c.66.1.17	TM-score=0.966 to 2o06A TM-score=0.871 to native SCOP code=c.66.1.17	TM-score=0.974 to 2o06A TM-score=0.875 to native SCOP code=c.66.1.17

Experimental Structure

Download 3o4fC

SCOP code=c.66.1.17