Template-based Modeling Results for SPEB_ECOLI

Submitted Primary Sequence

>Length 306
MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQAAKKGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQAAKKGE
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCEEEEHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQAAKKGE
544213322211011000002021113323230100000010220121220021012001200111222223122313123301001001010111103200220221023013222100001021100000020004311300000000000012311312100000001321213231000000133123222120010110223103200220131123210000000100010101111012110010210020020034120000000100121132210010001000100011023325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQAAKKGE
1	MUSTER	3nipA	0.385	0.984	3.127	threading_1	HPQPLDAAEIPRFAGIPTFMRLPAFT--DPAALQVGLIGVPWDGGTTNRAGARHGPREVRNLSSLMRKVHH--VSRIAPYDLVRVGDLGDAPVNPIDLLDSLRRIEGFYRQVHAAGTLPLSVGGDHLVTLPIFRALGR-ERPLGMVHFDAHSDTNDRDNPYTHGTPFRRAIEEGLLDPLRTVQIGIRGAFARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAFAPGTGTPEIGGMTSLQAQQLVRGLRGLDLVGADVVEVSPPFDVGGATALVGATMMFELLCLLAESAAR
2	SPARKS	3nioa	0.371	0.977	5.555	threading_2	LHQPLGGNEMPRFGGIATMMRLPHVQSPELDALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNM--ATGAAPFDSLNVADIGDVAINTFNLLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAI---KHGVGLVHVDAHADVNDHFGEIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGWSRQGFRVVQAEECWH-SLEPLMAEVRE-VGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTTGNTSLLGANLLYEMLCVLPGVVRR
3	PROSPECT2	3nipA	0.382	0.984	5.099	threading_3	HPQPLDAAEIPRFAGIPTFMRLPA--FTDPAALQVGLIGVPWDGGTTNRAGARHGPREVRNLSSLMRKVHH--VSRIAPYDLVRVGDLGDAPVNPIDLLDSLRRIEGFYRQVHAAGTLPLSVGGDHLVTLPIFRALGR-ERPLGMVHFDAHSDTNDRDNPYTHGTPFRRAIEEGLLDPLRTVQIGIRGSVARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAFAPGTGTPEIGGMTSLQAQQLVRGLRGLDLVGADVVEVSPPFDVGGATALVGATMMFELLCLLAEARSA
4	PPA-I	3nipA	0.382	0.984	4.286	threading_4	HPQPLDAAEIPRFAGIPTFMRLPAFT--DPAALQVGLIGVPWDGGTTNRAGARHGPREVRNLSSLMRKVHH--VSRIAPYDLVRVGDLGDAPVNPIDLLDSLRRIEGFYRQVHAAGTLPLSVGGDHLVTLPIFRALGR-ERPLGMVHFDAHSDTNDRDNPYTHGTPFRRAIEEGLLDPLRTVQIGIRGSVARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAFAPGTGTPEIGGMTSLQAQQLVRGLRGLDLVGADVVEVSPPFDVGGATALVGATMMFELLCLLAESAAR
5	HHPRED-l	1gq6_A	0.392	0.951	4.357	threading_5	---------SPRYAQIPTFMRLPHDPQ--PRGYDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGIDRGP--GTFDLINCVDAGDINLTPFDMNIAIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSDTNPYGGRYHHGTPFRHGIDEKLIDPAAMVQIGIRGHYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDHGGITSILATEIGAELLYQYARAH--
6	HHPRED-g	1gq6_A	0.388	0.951	3.891	threading_6	---------SPRYAQIPTFMRLPHDP--QPRGYDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGIDR--GPGTFDLINCVDAGDINLTPFDMNIAIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSDTNPAGGRYHHGTPFRHGIDEKLIDPAAMVQIGIRGDYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDHGGITSILATEIGAELLYQYARAH--
7	SP3	3nioa	0.371	0.977	5.699	threading_7	LHQPLGGNEMPRFGGIATMMRLPHVQSPELDALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNMA--TGAAPFDSLNVADIGDVAINTFNLLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAI---KHGVGLVHVDAHADVNDHFGEIAHGTTFRRAVEEDLLDCDRVVQIGLRAQNWSRQGFRVVQAEECWH-SLEPLMAEVRE-VGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTTGNTSLLGANLLYEMLCVLPGVVRR
8	SAM-T99	3nipA	0.385	0.984	5.549	threading_8	HPQPLDAAEIPRFAGIPTFMRLPA--FTDPAALQVGLIGVPWDGGTTNRAGARHGPREVRNLSSLMRKVH--HVSRIAPYDLVRVGDLGDAPVNPIDLLDSLRRIEGFYRQVHAAGTLPLSVGGDHLVTLPIFRALGRER-PLGMVHFDAHSDTNFGDNPYTHGTPFRRAIEEGLLDPLRTVQIGIRGSFARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAFAPGTGTPEIGGMTSLQAQQLVRGLRGLDLVGADVVEVSPPFDVGGATALVGATMMFELLCLLAESAAR
9	MUSTER	1gq6B	0.392	0.951	2.993	threading_9	---------SPRYAQIPTFMRLPH--DPQPRGYDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGI--DRGPGTFDLINCVDAGDINLTPFDMNIAIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSDTNPAGGRYHHGTPFRHGIDEKLIDPAAMVQIGIRGHNPRGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDHGGITSILATEIGAELLYQYARAH--
10	SPARKS	1gq6a	0.392	0.951	5.015	threading_10	---------SPRYAQIPTFMRLPH--DPQPRGYDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGI--DRGPGTFDLINCVDAGDINLTPFDMNIAIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSDTNPYGGRYHHGTPFRHGIDEKLIDPAAMVQIGIRGHLARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDHGGITSILATEIGAELLYQYARAH--

Predicted Tertiary Structure


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TM-score=0.927 to 1gq6B SCOP code=c.42.1.1	TM-score=0.927 to 1gq6B SCOP code=c.42.1.1	TM-score=0.895 to 1gq6B SCOP code=c.42.1.1	TM-score=0.929 to 1gq6B SCOP code=c.42.1.1	TM-score=0.927 to 1gq6B SCOP code=c.42.1.1