Template-based Modeling Results for SODC_ECOLI

Submitted Primary Sequence

>Length 173
MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK
43210000000000000222232020100124122311010102223410200000210130310000022010312232141210200011011312222302222111010100102330201000002324222223210000011212123213211201200000003
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK
1	MUSTER	1esoA	1.000	0.890	3.839	threading_1	-------------------ASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK
2	SPARKS	1yaia	0.467	0.867	5.092	threading_2	----------------------QDLTVKMTDLQTGKPVGTIELSQNKYGVVFTPELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLT-LKELKGHAIMIHAGGDNHSDMPKALGGGGARVACGVIQ
3	PROSPECT2	2aqmA	0.552	0.890	3.280	threading_3	-------------------ESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDKPEPLGGGGARFACGVIE
4	PPA-I	1esoA	1.000	0.890	3.722	threading_4	-------------------ASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK
5	HHPRED-l	1eqw_A	0.562	0.884	3.328	threading_5	-------------------NTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVI-
6	HHPRED-g	1eqw_A	0.591	0.890	2.891	threading_6	-------------------NTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIE
7	SP3	1yaia	0.460	0.867	4.787	threading_7	--------------------QDLTVKMTDLQTGK--PVGTIELSQNKYGVVFTPELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLT-LKELKGHAIMIHAGGDNHSDMPKALGGGGARVACGVIQ
8	SAM-T99	2aqsA	0.491	0.919	3.334	threading_8	--------------TIPKGASIEVKVQQLDPVNGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEEEGELTAGLGAGGHWDPKGAQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNHSDHPAPLGGGGPRMACGVIK
9	MUSTER	2aqmA	0.552	0.890	3.740	threading_9	-------------------ESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDKPEPLGGGGARFACGVIE
10	SPARKS	1xsoa	0.293	0.809	4.347	threading_10	------------------------VKAVCVLAGSGDVKGVVHFEQQDEGVSVEGKIEGLTDGLHGFHIHVFGDN--------TNGCMSAGSHFNPENKNHGAPGDTDRHVGDLGNVTAE-GGVAQFKITDSSLKGPNSIIGRTAVVHEKADDLGKESLKTGNAGGRLACGVIG

Predicted Tertiary Structure


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TM-score=0.944 to 1esoA TM-score=0.999 to native SCOP code=b.1.8.1	TM-score=0.944 to 1esoA TM-score=0.999 to native SCOP code=b.1.8.1	TM-score=0.918 to 1oalA TM-score=0.941 to native SCOP code=b.1.8.1	TM-score=0.924 to 1esoA TM-score=0.977 to native SCOP code=b.1.8.1	TM-score=0.944 to 1esoA TM-score=0.999 to native SCOP code=b.1.8.1

Experimental Structure

Download 1esoA

SCOP code=b.1.8.1