Template-based Modeling Results for SODF_ECOLI

Submitted Primary Sequence

>Length 193
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
5523012021022001010001001000020030002100310322222232032003201100110011000000001001232223021300310130011022012101200131100000000213312010010132211122310000000000000002132111000100010000310141135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
1	MUSTER	1dt0A	0.682	0.995	4.258	threading_1	-AFELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKTSSGGIFNNAAQVWNHTFYWNCLSPNAGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPLTIGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFEG
2	SPARKS	2a03a	0.534	1.000	6.363	threading_2	MAITLPKLKYALNALSPHISEETLSFHYNKHHAGYVNKLNGLIKDTPLANKSLTDILKESTGAIFNNAAQIWNHSFYWDSMGPNCGGEPHGEIKEKIQEDFGSFNNFKDQFSNVLCGHFGSGWGWLALNKNNKLVILQTHDAGNPIKENTIPILTCDVWEHAYYIDYRNDRLSYVKAWWNLVNWNFANENLKN
3	PROSPECT2	3tqjA	0.615	0.995	5.216	threading_3	-AFELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEIIRKSDGGIFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDNNGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDFVMKNFKS
4	PPA-I	3tqjA	0.615	0.995	4.561	threading_4	-AFELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEIIRKSDGGIFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDNNGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDFVMKNFKS
5	HHPRED-l	1gv3_A	0.448	0.995	2.813	threading_5	NPAELPPLPYGYDALEKAIDAETMKLHHDKHHAAYVNNLNNALKKHPEQNSSVEALLRDIRTTVRNNGGGHLNHTIFWQIMSPDGGGQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNPQGQLQVVSTPNQDNPIMEGSYPIMGNDVWEHAYYLRYQNRRPEYLNNWWNVVNWSEINRRTQ-
6	HHPRED-g	1gv3_A	0.451	1.000	2.372	threading_6	NPAELPPLPYGYDALEKAIDAETMKLHHDKHHAAYVNNLNNALKKPELQNSSVEALLRDLRTTVRNNGGGHLNHTIFWQIMSPDGGGQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNPQGQLQVVSTPNQDNPIMEGSYPIMGNDVWEHAYYLRYQNRRPEYLNNWWNVVNWSEINRRTQA
7	SP3	2a03a	0.534	1.000	5.752	threading_7	MAITLPKLKYALNALSPHISEETLSFHYNKHHAGYVNKLNGLIKDTPLANKSLTDILKESTGAIFNNAAQIWNHSFYWDSMGPNCGGEPHGEIKEKIQEDFGSFNNFKDQFSNVLCGHFGSGWGWLALNKNNKLVILQTHDAGNPIKENGIPILTCDVWEHAYYIDYRNDRLSYVKAWWNLVNWNFANENLKN
8	SAM-T99	3tqjA	0.615	0.995	3.177	threading_8	-AFELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEIIRKSDGGIFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDNNGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDFVMKNFKS
9	MUSTER	3tqjA	0.615	0.995	4.244	threading_9	-AFELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEIIRKSDGGIFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDNNGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDFVMKNFKS
10	SPARKS	3ceia	0.529	0.990	6.081	threading_10	-MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPKATA-LSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVSQCYEW

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.984 to 1dt0A TM-score=0.982 to native SCOP code=a.2.11.1	TM-score=0.971 to 1dt0A TM-score=0.987 to native SCOP code=a.2.11.1	TM-score=0.936 to 1dt0A TM-score=0.971 to native SCOP code=a.2.11.1	TM-score=0.971 to 1dt0A TM-score=0.987 to native SCOP code=a.2.11.1	TM-score=0.971 to 1dt0A TM-score=0.987 to native SCOP code=a.2.11.1

Experimental Structure

Download 1isaA

SCOP code=a.2.11.1