Template-based Modeling Results for SODM_ECOLI

Submitted Primary Sequence

>Length 206
MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
55320120210120010101220010001200300021001013213312512032001203312231111031010000000000300332220312012101310110320121022002211000000001222101001023231111232221221000000000000000102121110010001000032013112345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
1	MUSTER	1en6A	0.995	0.995	4.690	threading_1	-SYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANLDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
2	SPARKS	1i0ha	0.995	0.995	6.021	threading_2	-SYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYFLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
3	PROSPECT2	1i0ha	0.995	0.995	5.024	threading_3	-SYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYFLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
4	PPA-I	1en6A	0.995	0.995	4.598	threading_4	-SYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANLDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
5	HHPRED-l	1ix9_A	0.995	0.990	2.907	threading_5	-SYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYFLKFQNRRPDYIKEFWNVVNWDEAAARFAAK-
6	HHPRED-g	1gv3_A	0.518	0.966	2.470	threading_6	NPAELPPLPYGYDALEKAIDAETMKLHHDKHHAAYVNNLNNALKKHPELQNSSVEALLRDLNSVPEDIRTTVRNNGGGHLNHTIFWQIMSPGGQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNQGQLQVVSTPNQDNPIM------EGSYPIMGNDVWEHAYYLRYQNRRPEYLNNWWNVVNWSEINRRTQAS-
7	SP3	2a03a	0.383	0.937	5.416	threading_7	MAITLPKLKYALNALSPHISEETLSFHYNKHHAGYVNKLNGLIKDT-PLANKSLTDILKES-------TGAIFNNAAQIWNHSFYWDSMGPGGEPHGEIKEKIQEDFGSFNNFKDQFSNVLCGHFGSGWGWLALNNNKLVILQTHDAGNPIKEN-----TGIPILTCDVWEHAYYIDYRNDRLSYVKAWWNLVNWNFANENLKNAL
8	SAM-T99	2rcvA	0.606	0.961	3.290	threading_8	-AYELPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADLDSVPENIRTAVRNNGGGHANHKLFWTLLSPGGEPTGALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVNNGKLEITSTPNQDSPLSEGK------TPILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSER-
9	MUSTER	1xreA	0.503	0.966	4.431	threading_9	-SFQLPKLSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLETLPKEIVTAVRNNGGGHYCHSLFWEVMSPGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGEELSVMSTPNQDTPLQE------GKIPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTVNWDRVNEKYLQAI
10	SPARKS	2a03a	0.383	0.937	5.728	threading_10	MAITLPKLKYALNALSPHISEETLSFHYNKHHAGYVNKLNGLIKDT-PLANKSLTDILKE-------STGAIFNNAAQIWNHSFYWDSMGPGGEPHGEIKEKIQEDFGSFNNFKDQFSNVLCGHFGSGWGWLALNNNKLVILQTHDAGNPIKEN-----TGIPILTCDVWEHAYYIDYRNDRLSYVKAWWNLVNWNFANENLKNAL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.997 to 1en6A TM-score=0.998 to native SCOP code=a.2.11.1	TM-score=0.997 to 1en6A TM-score=0.998 to native SCOP code=a.2.11.1	TM-score=0.988 to 1en6A TM-score=0.991 to native SCOP code=a.2.11.1	TM-score=0.988 to 1en6A TM-score=0.991 to native SCOP code=a.2.11.1	TM-score=0.997 to 1en6A TM-score=0.998 to native SCOP code=a.2.11.1

Experimental Structure

Download 1d5nA

SCOP code=a.2.11.1