Template-based Modeling Results for SMTA_ECOLI

Submitted Primary Sequence

>Length 261
MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV
552320120031003212221202002100021012002311343110000000202001200321110000000230022013003432123101001010320122232100000001002102103100210021033200000010111010000000000110121023333222223212212100200250212011110010001104333333311200020112104232112002000000123425458
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV
1	MUSTER	2p7iB	0.202	0.835	1.480	threading_1	---YNFDFDVHPFVRAFTPFFR----------------------PGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRL-----KDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHIDDPVALLKRINDDWAEGGRLFLVCPNANAVSRQIAVKGIISH-NSAVTEAEFAH-GHRCTYALDTLERDASRAGLQVTYRSGIFFLANILQTDILSKEYLDGCYQLGQQY----P--DLCASIFLLCEKGINQ---
2	SPARKS	2p7ia	0.198	0.831	2.065	threading_2	-------------------------NFDFDVHPFVRAFTPF-FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGR-----LKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDDPVALLKRINDWLAEGGRLFLVCPNANAVSRQIAVKGIISHNSAVTEAEFA--HGHRCTYALDTLERDASRAGLQVTYRSGIFF-KALANDQILQTDILKEYLDGCYQLGQQ--YPDLCASIFLLCEKG------
3	PROSPECT2	2p7hA	0.180	0.831	2.398	threading_3	-----------NFDFDVHPFVRAFTPF---------------FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGR-----LKDGITYIHSRFEDAQL--PRRYDNIVLTHVLEHIDDPVALLKRIDDWLAEGGRLFLVCPNANAVSRQIAVKGIIS--HNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSGIFFWDQILQTDILSKEYLDGCYQLGQQ------YPDLCASIFLLCEKGINQ---
4	PPA-I	3cc8A	0.161	0.785	1.569	threading_4	-------------------------------AVNPNLLKHIKKEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLD--------HVVLGDIETDP-YEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAG-NWTYTEYGLLDKTHI---RFFTFNELRFLK--AGYSISKVDRVYV-------DHKYEPLIEELYGICKKYRLGSGFAETVVFQYIIEAEKSQL---
5	HHPRED-l	1vl5_A	0.201	0.801	1.561	threading_5	------------------------------GSDLAKL-QIAALKGEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQ-P-FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAENDAFDV-F---YNYVEKER------DYSHHRAWKKSDWLK-LEEAGFELEELHCFHIFEDWCDR-NVTTEKKQELSDFIQKFKVEDGRYFRGESIL-KARKPT-----
6	HHPRED-g	1vl5_A	0.214	0.789	1.309	threading_6	------------------------------GSDLAKL-QIAALGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQ-P-FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNAPENDAF--DVF--YNYVEKERDYSH------HRAWKKSDWLK-LEEAGFELEELHCFHIFEDWCDR-N---VTTEKKQELSDFEYYQDGRYSRGESIL-KARKPT-----
7	SP3	2p7ia	0.198	0.831	2.311	threading_7	-----------NFDFD---------VHPFVRAFT------PFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGR-----LKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDDPVALLKRINDWLAEGGRLFLVCPNANAVSRQIAVKGIISHNSAVTEAEFA--HGHRCTYALDTLERDASRAGLQVTYRSGIFF-KALANDQILQTDILKEYLDGCYQLGQQ--YPDLCASIFLLCEKG------
8	SAM-T99	3mggA	0.208	0.663	2.123	threading_8	-----------------------------------------YPPGAKVLEAGCGIGAQTVILAKNDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLP-FEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKA-IEAWNCLIRVQAYKGNSLVG---RQIYPLLQESGFEKIRVEPR-VYIDSSKPELVD----------------------------------------
9	MUSTER	2avnA	0.197	0.893	1.433	threading_9	LR-EFYDRIARAYDSYET------PKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSK-ELEVAREKGVK-------NVVEAKAEDLP-FPSGAFEAVLALDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQIAWDQITRFLKTQTTSGTTLFSFNSYAFKPEDLDSL---EGFETVDIRGIGVEY---PDERIS-EREETIFRLEQELSRDRNIIWKADHIFFVLKKKR-----
10	SPARKS	3sm3a	0.176	0.716	1.977	threading_10	-------------------------------LDLYPIIHNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKAEFKVENASSLS-FHDSSFDFAVMQAFLTSVPDRSRIIKEVFRVLKPGAYLYLVEFGQNWH--LKLYRKRYLHDFPITKEETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELGNKIIAQKLLE----------------------------------------

Predicted Tertiary Structure


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TM-score=0.883 to 2p7iB SCOP code=c.66.1.41	TM-score=0.897 to 2p7iB SCOP code=c.66.1.41	TM-score=0.886 to 2p7iB SCOP code=c.66.1.41	TM-score=0.874 to 2p7iB SCOP code=c.66.1.41	TM-score=0.646 to 2p7iB SCOP code=c.66.1.41