Template-based Modeling Results for SSRP_ECOLI

Submitted Primary Sequence

>Length 160
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
CCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEEEEEEHHHHHCCCCCCEEEEEEEECCEEEEEEEECCCHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
5544424432210002133031301011101000001002020032230202100000221100000010011210122221222212200022320220122134311000000000330101010000203333122231333312122232133245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
1	MUSTER	1k8hA	0.470	0.825	4.173	threading_1	-----GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREGTVSFKDSFVRIENGEAWLYNLYIAPYKHATIE-NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR----------------------
2	SPARKS	1k8ha	0.470	0.825	5.307	threading_2	-----GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREGTVSFKDSFVRIENGEAWLYNLYIAPYKHATIE-NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR----------------------
3	PROSPECT2	1k8ha	0.470	0.825	2.715	threading_3	-----GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREGTVSFKDSFVRIENGEAWLYNLYIAPYKHATIE-NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR----------------------
4	PPA-I	1k8hA	0.470	0.825	10.816	threading_4	-----GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREGTVSFKDSFVRIENGEAWLYNLYIAPYKHATIE-NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR----------------------
5	HHPRED-l	1p6v_A	0.492	0.775	8.177	threading_5	-------SDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREGTVSFKDSFVRIENGEAWLYNLYIAPYKHA----NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKL-------------------------
6	HHPRED-g	1p6v_A	0.492	0.775	7.120	threading_6	-------SDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREGTVSFKDSFVRIENGEAWLYNLYIAPYKHA----NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKL-------------------------
7	SP3	1k8ha	0.470	0.825	2.285	threading_7	-----GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREGTVSFKDSFVRIENGEAWLYNLYIAPYKHATIE-NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR----------------------
8	SAM-T99	1k8hA	0.470	0.825	7.044	threading_8	-----GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLRKGTVSFKDSFVRIENGEAWLYNLYIAPYKHATI-ENHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR----------------------
9	MUSTER	1j1hA	0.467	0.762	3.933	threading_9	M----------APVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGS-YANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFERGYAKVLLGLARGK---------------------------
10	SPARKS	1e5da1	0.143	0.831	0.806	threading_10	-PTNKSMWHSTEKMAR--------VLAESFRD----EGCTVKLMWCKACHHSQIMSEISDAGAVIVNGILPYVAGTLQYIKGLRPQNKIGGASGESTKVLAEWLTGMGFDMPATPVKVKN--------------VPTHADYEQLKTMAQTIARALKAKLA

Predicted Tertiary Structure


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TM-score=0.880 to 1k8hA SCOP code=b.111.1.1	TM-score=0.879 to 1k8hA SCOP code=b.111.1.1	TM-score=0.875 to 1k8hA SCOP code=b.111.1.1	TM-score=0.875 to 1k8hA SCOP code=b.111.1.1	TM-score=0.880 to 1k8hA SCOP code=b.111.1.1