Template-based Modeling Results for SMP_ECOLI

Submitted Primary Sequence

>Length 214
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
5533113121010000000000000001001202232222222102300310021001100211323233232022002301322100000001331100020222131322132324322222322000101244121000000011210121122022111200000000000000001001223433233121112123323333423448
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
1	SPARKS	3lifa	0.145	0.836	1.344	threading_1	--------------------------------DSHKIALAQSETERNLSHSLAEHATHTFQGADVVPHPSPVFNERLRALADNLPQLSDVAILDADGQLTYASVKPVPFRYHRANDDHTQSRTSGVWVSRRLETTDGFFGVVVATIESEYFSTFYKTFDLGPG---GSISLLHSDGRLLIQSLQTGRDANVLFQKALPRSPDGYYLTVSPFDGL
2	PROSPECT2	3e4oA	0.171	0.902	1.080	threading_2	---AGLAGQSRIDASLKA-----------------SLLRAVVERQRALPLVLADDAAI-RGALLSPDRPSLDRINRKLEALATSAEAAVIYLIDRSGVAVAASNWQEPFRLAVRDGAEHFAGTVSKRISRRVDGPGGPLGVIVAKLEFDGVEADWQASGKPLPSWRFTTKPIAEDRLAPIRESLQFGDAPLLPLPFRKIEARPDGSLLPGDSTA
3	PPA-I	3lifA1	0.151	0.589	1.200	threading_3	--------------------------------DSHKIALAQSETERNLSHSLAEHATHTFQGADVVPHPSPVFNERLRALADNLPQLSDVAILDADGQLTYASVKPVPFRYHRANDDHTLSRTSGVWVSRRLETTDGKFGVVVATIESEYFSTFYKTF--------------------------------------------------------
4	HHPRED-l	3b47_A	0.206	0.477	1.564	threading_4	-------------------------------------I--MDLQTRN-TRGLSTLVVRDIGELMMA--GDMAVIERYVADVRGKGAVLDLRIYDAAGRPA-------APDGEAALSGAT--R-HVLSFIVPLANEARFNGAMLLTTSLEEGYAG------------------------------------------------------------
5	HHPRED-g	3b42_A	0.168	0.500	2.050	threading_5	---------------------------------------SSLDLQLKNARNLAGLIIHDIDGYMMKGDS--SEVDRFISAVKSKNFIMDLRVFDEQAKEV-SPTPQTPAKIQQAIAAGRTLEFGTLSLVLPFDAGAAYLGGLLVTTSIE-----------------------------------------------------------------
6	PROSPECT2	2p7jA	0.113	0.911	1.039	threading_6	NNVENTAKEALHQLAYTG-----------------REYNNIQDQIETISDLLGHSQS--LYDYLREPSKANLTILEWSSVARNQKLYKQIRFLDTSGTEKVRIKYDFKFKYAQSLDNEQVYPLSPSLRILPISVNDVRQGYLVLNVDIEYLSSLLNYSPVRDFHIELFYIASPDESRLYGDIIPERSQFNFSNYPDIWPRVVSEQAGYSYSGEK
7	PPA-I	3lifA	0.151	0.836	1.083	threading_7	--------------------------------DSHKIALAQSETERNLSHSLAEHATHTFQGADVVPHPSPVFNERLRALADNLPQLSDVAILDADGQLTYASVKPVPFRYHRANDDHRTSGVWVFVVSRRLETTDGFFGVVVATIESEYFSTFYKTFDLGPG---GSISLLHSDGRLLIQSLQTGRDANVLFQKALPRSPDGYYLTVSPFDGL
8	HHPRED-l	3b42_A	0.176	0.505	1.560	threading_8	---------------------------------------SSLDLQLKNARNLAGLIIHDIDGYMMK--GDSSEVDRFISAVKSKNFIMDLRVFDEQAKEVSPTPSQTPNKIQQAIAAGRTLEFGRLSLVLPFDAGAAYLGGLLVTTSIE-----------------------------------------------------------------
9	HHPRED-g	3by8_A	0.208	0.561	1.975	threading_9	----------------------------------DMTRDGLANKALAVARTLADSPE--IRQGLQKKP-QESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKALNGEENGFLQALRVFTPIYDENKQIGVVAIGLELSRVT---QQIND------------------------------------------------------
10	PROSPECT2	1t33A	0.149	0.818	1.022	threading_10	MNIPTTTTKGEQAKSQLIAAALAQFGEYGAALAGQNIALACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKN---------------MIMLLTQEDTVNLSKFISREQLS------------------------PTSAYQLVHEQVIDPLHTHLTRLVAAYTMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELTQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.520 to 2p7jB SCOP code=d.110.6.2	TM-score=0.581 to 1p0zA SCOP code=d.110.6.1	TM-score=0.429 to 1p0zA SCOP code=d.110.6.1	TM-score=0.360 to 1c17L SCOP code=f.17.1.1	TM-score=0.358 to 1y4oA SCOP code=d.110.7.1