Template-based Modeling Results for SMF_ECOLI

Submitted Primary Sequence

>Length 374
MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV
CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCHHHEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV
45111000000202202031012003202321201110033121223102301212331021011103422110001203100210220231011000101031232110000012202220130022002101321000001113000000020004220100000010022111430030011014210000021123122222100200100000030000010223212100020012212200002112123103001101321010022032002102100321232233222233333222211200211133212021003302120320010001020101010122010102211223323234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV
1	MUSTER	3majA	0.332	0.917	2.905	threading_1	LTAQRIDWRLIRAENVGPRTFRSLINHFGSARAALERLPELAR-RGGAARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVRPIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQTRG-AAISEPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASILEGEPD--------------TGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-------------
2	SPARKS	3maja	0.321	0.917	7.968	threading_2	LTAQRIDWRLIRAENVGPRTFRSLINHFGSARAALERLPELA-RRGGAARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALVARPIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQT-RGAAISEPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVA--------------SILEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-------------
3	PROSPECT2	3majA	0.321	0.917	5.050	threading_3	GTAQRIDWRLIRAENVGPRTFRSLINHFGSARAALERLPELAR-RGGAARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAARPIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASL--SSGTVAVLAGGHDKIYPAEHEDLLLDIIQTRG-AAISEPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVA--------------SILEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVS-------------L
4	PPA-I	3majA	0.332	0.917	3.897	threading_4	LTAQRIDWRLIRAENVGPRTFRSLINHFGSARAALERLPELA-RRGGAARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAARPIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISE-PLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVAS--------------ILEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-------------
5	HHPRED-l	3maj_A	0.346	0.904	10.377	threading_5	LTEAIDW-RLIRAENVGPRTFRSLINHFGSARAALERLPARRGGAAR-AGRI--PSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEA-ARP-IAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSS--GTVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISE-PLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASILE--------------GEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-------------
6	HHPRED-g	3maj_A	0.347	0.901	9.489	threading_6	LTERIDW-RLIRAENVGPRTFRSLINHFGSARAALERLPERRGGAAR-AGRI--PSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEA-ARP-IAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSS--GTVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISE-PLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASILE---------------GPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-------------
7	SP3	3maja	0.332	0.917	8.504	threading_7	LTAQRIDWRLIRAENVGPRTFRSLINHFGSARAALER-LPELARRGGAARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVRPIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQTRG-AAISEPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASILEGEP--------------DTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-------------
8	SAM-T99	3majA	0.339	0.914	9.243	threading_8	TEAQRIDWRLIRAENVGPRTFRSLINHFGSARAALERLPELARRG--AARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVRPIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISE-PLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASILEGEP--------------DTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL-------------
9	MUSTER	3majA3	0.439	0.500	1.697	threading_9	------------------------------------------------------------------------------------------------HALPEALAVA-RPIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLS--SGTVAVLAGGHDKIYPAEHEDLLLDIIQTRG-AAISEPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLITSASDIVEAVASIL---------------------------------------------------------------------------------------
10	SPARKS	2iz5a	0.178	0.420	1.431	threading_10	---------------------------------------------------------------------------------------------------------RKPIIGVMGPADTAENQLVMANELGKQIATHGWILLTGRSLGVMHEAMKGAKEAGGTTIGVLPGP-DTISD----------------------AVDIPIVTGLGARDNINALSSNVLVAVGMG--PGTAAEVALALKAKKPVVLLGTQPEAE--KFFTSLDAGLVHVAADVAGAIAAVKQLLAK-------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.557 to 1rcuA SCOP code=c.129.1.1	TM-score=0.558 to 1rcuA SCOP code=c.129.1.1	TM-score=0.560 to 1rcuA SCOP code=c.129.1.1	TM-score=0.564 to 1rcuA SCOP code=c.129.1.1	TM-score=0.560 to 1rcuA SCOP code=c.129.1.1